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OR_07102018_0_5m_scaffold_69

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Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_69_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_69_2
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78..941)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IN15_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11044.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
OR_07102018_0_5m_scaffold_69_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1041..2006)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CJV8_SPHYA
DNA transfer protein {ECO:0000313|EMBL:KKC25064.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
OR_07102018_0_5m_scaffold_69_4
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1996..3993)
DNA (1998bp) protein (666aa)
TRAG family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VGK1_9SPHN
Conjugal transfer protein TraG {ECO:0000313|EMBL:KKC25063.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
TRAG family protein
OR_07102018_0_5m_scaffold_69_5
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3959..4963)
DNA (1005bp) protein (335aa)
UPI0003D68C68 related cluster n=1 Tax=unknown RepID=UPI0003D68C68
Type IV secretion protein VirB11 {ECO:0000313|EMBL:ETI63519.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
P-type DNA transfer ATPase VirB11
OR_07102018_0_5m_scaffold_69_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4966..6189)
DNA (1224bp) protein (408aa)
Conjugal transfer protein TrbI n=1 Tax=Sphingobium baderi LL03 RepID=T0GP16_9SPHN
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KKC24976.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
conjugation TrbI family protein
OR_07102018_0_5m_scaffold_69_7
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6195..6986)
DNA (792bp) protein (264aa)
P-type conjugative transfer protein VirB9 n=1 Tax=Sphingobium baderi LL03 RepID=T0GY43_9SPHN
Conjugal transfer protein {ECO:0000313|EMBL:KKC24975.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
P-type conjugative transfer protein VirB9
OR_07102018_0_5m_scaffold_69_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6983..7672)
DNA (690bp) protein (230aa)
UPI0003D59DF7 related cluster n=1 Tax=unknown RepID=UPI0003D59DF7
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KKC24974.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
VirB8 family protein
OR_07102018_0_5m_scaffold_69_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7675..7992)
DNA (318bp) protein (106aa)
UPI0003D68B7D related cluster n=1 Tax=unknown RepID=UPI0003D68B7D
Uncharacterized protein {ECO:0000313|EMBL:ETI63523.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
OR_07102018_0_5m_scaffold_69_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8010..8954)
DNA (945bp) protein (315aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Sphingomonas RepID=A5VH55_SPHWW
TrbL/VirB6 plasmid conjugal transfer protein
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABQ71621.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_07102018_0_5m_scaffold_69_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8970..9188)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SF82_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU11509.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
OR_07102018_0_5m_scaffold_69_12
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9185..9901)
DNA (717bp) protein (239aa)
Type IV secretion system family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VU08_9SPHN
type IV secretion system family protein
Tax=GWF1_Sphingomonadales_63_6_curated
OR_07102018_0_5m_scaffold_69_13
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9906..12323)
DNA (2418bp) protein (806aa)
Type IV secretion/conjugal transfer ATPase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VFE6_9SPHN
Type IV secretion/conjugal transfer ATPase {ECO:0000313|EMBL:EJU11507.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
type IV secretion/conjugal transfer ATPase
OR_07102018_0_5m_scaffold_69_14
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12316..12651)
DNA (336bp) protein (112aa)
UPI0003D5C501 related cluster n=1 Tax=unknown RepID=UPI0003D5C501
type IV secretory pathway, VirB3 family protein
Tax=GWF1_Sphingomonadales_63_6_curated
OR_07102018_0_5m_scaffold_69_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12662..13003)
DNA (342bp) protein (114aa)
VIRB2 type IV secretion fmaily protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VH59_SPHWW
VIRB2 type IV secretion fmaily protein
VIRB2 type IV secretion fmaily protein {ECO:0000313|EMBL:ABQ71625.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_07102018_0_5m_scaffold_69_16
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13000..13665)
DNA (666bp) protein (222aa)
Lytic transglycosylase, catalytic n=1 Tax=Sphingomonas sp. LH128 RepID=J8SF78_9SPHN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EJU11504.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
lytic transglycosylase, catalytic
OR_07102018_0_5m_scaffold_69_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14098..14856)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000360E4D2
Transcriptional regulator {ECO:0000313|EMBL:KFD26265.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
regulatory protein, LuxR
OR_07102018_0_5m_scaffold_69_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15317)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDH8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42812.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
OR_07102018_0_5m_scaffold_69_19
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15314..16102)
DNA (789bp) protein (263aa)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B49E43
Membrane protein {ECO:0000313|EMBL:EXS70645.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
membrane protein
OR_07102018_0_5m_scaffold_69_20
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16108..17046)
DNA (939bp) protein (313aa)
beta-lactamase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3CC93
beta-lactamase-like protein
Tax=GWF1_Sphingomonadales_63_6_curated
OR_07102018_0_5m_scaffold_69_21
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17152..17808
DNA (657bp) protein (219aa)
1-Cys peroxiredoxin (EC:1.11.1.15)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HHI5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11618.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
OR_07102018_0_5m_scaffold_69_22
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17811..18182
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HF19_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11617.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
ArsR family transcriptional regulator
OR_07102018_0_5m_scaffold_69_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18217..19218)
DNA (1002bp) protein (334aa)
Cytochrome c family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXQ6_9SPHN
DNA, contig: SP648 {ECO:0000313|EMBL:GAN14945.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative cytochrome c
OR_07102018_0_5m_scaffold_69_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19269..19811)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXR3_9SPHN
DNA, contig: SP648 {ECO:0000313|EMBL:GAN14938.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
OR_07102018_0_5m_scaffold_69_25
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19857..20294)
DNA (438bp) protein (146aa)
Thioredoxin n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCS1_SPHWW
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABQ70087.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_07102018_0_5m_scaffold_69_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20291..20614)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036D4290
Transcriptional regulator of arsR family {ECO:0000313|EMBL:GAO54836.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ArsR family transcriptional regulator
OR_07102018_0_5m_scaffold_69_27
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20611..23859)
DNA (3249bp) protein (1083aa)
multidrug transporter AcrB n=1 Tax=Sphingobium xenophagum RepID=UPI00035E5FFF
Multidrug transporter AcrB {ECO:0000313|EMBL:KHK91126.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
acriflavin resistance protein
OR_07102018_0_5m_scaffold_69_28
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23856..24866)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035C83BB
RND efflux membrane fusion protein {ECO:0000313|EMBL:GAO53634.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
RND family efflux transporter MFP subunit
OR_07102018_0_5m_scaffold_69_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24880..25215)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNL4_9SPHN
hypothetical protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
OR_07102018_0_5m_scaffold_69_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25300..26583
DNA (1284bp) protein (428aa)
NADH dehydrogenase-like protein {ECO:0000313|EMBL:AKH42822.1}; EC=1.6.99.- {ECO:0000313|EMBL:AKH42822.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Sulfide-quinone oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1F3_9SPHN
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying items 1-30 of 84 in total

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