ggKbase home page

OR_07102018_0_5m_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 65 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_111_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)
ABC transporter related protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F134_EMTOG
ABC transporter related protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_2
Prevotella oralis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(279..1718)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=2 Tax=Prevotella oralis RepID=E7RNW1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFZ37404.1}; TaxID=873533 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oralis ATCC 33269.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
OR_07102018_0_5m_scaffold_111_3
unknown

Not on your lists

comp(1764..1979)
DNA (216bp) protein (72aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_111_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2143..3255)
DNA (1113bp) protein (371aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Niabella soli DSM 19437 RepID=H1NUQ0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17880.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07102018_0_5m_scaffold_111_5
unknown

Not on your lists

comp(3310..3525)
DNA (216bp) protein (72aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_111_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3699..5303)
DNA (1605bp) protein (535aa)
Vitamin K epoxide reductase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F123_EMTOG
Vitamin K epoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5504..6139
DNA (636bp) protein (212aa)
Two component transcriptional regulator, LuxR family id=4016436 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
two component transcriptional regulator, LuxR family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6141..6875)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J2_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6952..8292
DNA (1341bp) protein (447aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8298..9065
DNA (768bp) protein (256aa)
exodeoxyribonuclease III n=1 Tax=Niabella aurantiaca RepID=UPI00036C7AB3
exodeoxyribonuclease III
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9068..9373
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK46_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9670..9939
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG
histone family protein DNA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9943..10155
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUW7_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10211..11536)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000372F312
class V aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11582..11827
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CF779
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11824..12564)
DNA (741bp) protein (247aa)
Methyltransferase FkbM family id=3583497 bin=GWC1_Spirochaetes_27_15 species=Methanococcus vannielii genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
FkbM family methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12601..13509)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003659B34
glycosyl transferase family 2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13576..14514
DNA (939bp) protein (313aa)
Putative glycosyltransferase epsH n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K944_9BACT
putative glycosyltransferase epsH
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14511..15575)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000377ED53
group 1 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15579..16490)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B2E26
LAO/AO transport system ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16525..17709
DNA (1185bp) protein (395aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17701..18591)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D73FB
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18628..19266
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CC0B2
peptidase S16 lon domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19272..20000
DNA (729bp) protein (243aa)
Type III pantothenate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD3_NIAKG
putative Baf family transcriptional acitvator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19972..21348
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003644115
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21317..21934
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21945..22934
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23003..23554
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLZ3_9BACT
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23547..24353
DNA (807bp) protein (269aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_111_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24365..25831
DNA (1467bp) protein (489aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 65 in total

View Taxonomy