ggKbase home page

OR_07102018_0_5m_scaffold_3178

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_3178_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2..337
DNA (336bp) protein (112aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F5_9FLAO
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(343..867)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(950..1423)
DNA (474bp) protein (158aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(1518..2393)
DNA (876bp) protein (292aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2756..3487
DNA (732bp) protein (244aa)
alkyl hydroperoxide reductase n=1 Tax=Pedobacter agri RepID=UPI00029A0B19
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3493..4365)
DNA (873bp) protein (291aa)
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI00035E858E
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RpoD subfamily RNA polymerase sigma-70 subunit
OR_07102018_0_5m_scaffold_3178_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4589..4972
DNA (384bp) protein (128aa)
Activator of HSP90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK6_NIAKG
activator of HSP90 ATPase 1 family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07102018_0_5m_scaffold_3178_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4969..5586)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AF00F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 8 items

View Taxonomy