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OR_07102018_0_5m_scaffold_75

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Displaying items 1-30 of 141 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_75_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..2187
DNA (2187bp) protein (729aa)
Acriflavin resistance protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3I5_ACIDE
Acriflavin resistance protein {ECO:0000313|EMBL:EER60981.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
acriflavin resistance protein
OR_07102018_0_5m_scaffold_75_trna_1
unknown

Not on your lists

2289..2379
DNA (91bp)
transferRNA Leu
OR_07102018_0_5m_scaffold_75_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2451..3761
DNA (1311bp) protein (437aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3I4_ACIDE
OR_07102018_0_5m_scaffold_75_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3885..4493
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
clpP; ATP-dependent clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3I3_ACIDE
OR_07102018_0_5m_scaffold_75_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4593..5858
DNA (1266bp) protein (422aa)
ATP-dependent protease n=1 Tax=Acidovorax radicis RepID=UPI00023769BE
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=GWA2_Burkholderiales_64_37_curated
OR_07102018_0_5m_scaffold_75_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5987..8419
DNA (2433bp) protein (811aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Lon protease n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3I1_ACIDE
ATP-dependent protease La
OR_07102018_0_5m_scaffold_75_trna_2
unknown

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8505..8577
DNA (73bp)
transferRNA Gly
OR_07102018_0_5m_scaffold_75_trna_3
unknown

Not on your lists

8639..8709
DNA (71bp)
transferRNA Cys
OR_07102018_0_5m_scaffold_75_trna_4
unknown

Not on your lists

8898..8970
DNA (73bp)
transferRNA Gly
OR_07102018_0_5m_scaffold_75_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9200..11143
DNA (1944bp) protein (648aa)
Integrase n=3 Tax=Pseudomonas aeruginosa RepID=U5AKF3_PSEAI
Integrase {ECO:0000313|EMBL:CDM23708.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
integrase
OR_07102018_0_5m_scaffold_75_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11198..11839)
DNA (642bp) protein (214aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13VS5_BURXL
Regulatory protein, LysR-family
Regulatory protein, LysR-family {ECO:0000313|EMBL:CDM23709.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..13193)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q13VS7_BURXL
Transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM23710.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13263..13496
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KDD61982.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
hypothetical protein
OR_07102018_0_5m_scaffold_75_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13736..14416)
DNA (681bp) protein (227aa)
Transcriptional regulator, TetR family n=3 Tax=Proteobacteria RepID=Q13VS9_BURXL
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDM23711.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_11
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14626..16161
DNA (1536bp) protein (512aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JH94_AERHY
Multidrug transporter {ECO:0000313|EMBL:KGM52067.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
RND transporter
OR_07102018_0_5m_scaffold_75_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16158..17729
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JAH4_AERHY
Inner membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDM23713.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Inner membrane component of tripartite multidrug resistance system
OR_07102018_0_5m_scaffold_75_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17737..18771
DNA (1035bp) protein (345aa)
MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily n=2 Tax=Proteobacteria RepID=Q13VU8_BURXL
Membrane fusion component of tripartite multidrug resistance system
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDM23714.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_14
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18803..19105
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida RepID=Q706R2_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF84939.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
OR_07102018_0_5m_scaffold_75_15
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19523..19795
DNA (273bp) protein (91aa)
Lipid A deacylase n=2 Tax=Proteobacteria RepID=Q13VV0_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE31789.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
OR_07102018_0_5m_scaffold_75_16
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20198..21400
DNA (1203bp) protein (401aa)
Putative esterase of the alpha-beta hydrolase superfamily n=3 Tax=Proteobacteria RepID=Q13VV1_BURXL
alpha-beta hydrolase family esterase
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:ABE31788.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
OR_07102018_0_5m_scaffold_75_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..23308)
DNA (1851bp) protein (617aa)
Integrating conjugative element relaxase n=3 Tax=Pseudomonas aeruginosa RepID=V8GP33_PSEAI
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:CDM23719.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
OR_07102018_0_5m_scaffold_75_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23626..24252
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1W5S8_ACISJ
Integrase
Integrase {ECO:0000313|EMBL:CDM23720.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24265..24897
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBE5_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23721.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24982..25347
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=B7V517_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23722.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25359..26879)
DNA (1521bp) protein (507aa)
STY4579 n=5 Tax=Proteobacteria RepID=B7V518_PSEA8
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM23723.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26895..27266)
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=B7V519_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23724.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27263..28660)
DNA (1398bp) protein (466aa)
Conserved hpothetical protein n=4 Tax=Proteobacteria RepID=B7V520_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23725.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28670..29617)
DNA (948bp) protein (316aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=B7V521_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23726.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29614..30060)
DNA (447bp) protein (149aa)
Integrating conjugative element protein n=4 Tax=Pseudomonas aeruginosa RepID=U5AHN1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23727.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
OR_07102018_0_5m_scaffold_75_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30241..31002)
DNA (762bp) protein (254aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=B7V524_PSEA8
Protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:CDM23728.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying items 1-30 of 141 in total

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