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OR_07102018_0_5m_scaffold_280

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_280_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1406)
DNA (1404bp) protein (468aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACM32438.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACM32438.1};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Gamma-glutamyltransferase 1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4V3_ACISJ
OR_07102018_0_5m_scaffold_280_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1569..3146)
DNA (1578bp) protein (526aa)
Phosphodiesterase/alkaline phosphatase D n=1 Tax=Acidovorax sp. CF316 RepID=J1EAI7_9BURK
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:EJE49274.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
alkaline phosphatase
OR_07102018_0_5m_scaffold_280_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3201..4727)
DNA (1527bp) protein (509aa)
Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TB49_ACIDE
Diguanylate cyclase {ECO:0000313|EMBL:EER58297.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
diguanylate cyclase
OR_07102018_0_5m_scaffold_280_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..5793)
DNA (975bp) protein (325aa)
Zinc-binding alcohol dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0V9_9BURK
zinc-binding alcohol dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
OR_07102018_0_5m_scaffold_280_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5959..6747
DNA (789bp) protein (263aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
surE; 5'(3')-nucleotidase/polyphosphatase (EC:3.6.1.11)
stationary phase survival protein SurE n=1 Tax=Acidovorax radicis RepID=UPI000237832E
OR_07102018_0_5m_scaffold_280_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7523
DNA (777bp) protein (259aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0V7_9BURK
protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
OR_07102018_0_5m_scaffold_280_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7535..8416
DNA (882bp) protein (294aa)
Peptidase M23 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4A9_ACIDE
Peptidase M23 {ECO:0000313|EMBL:EER60668.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidase M23
OR_07102018_0_5m_scaffold_280_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..9507
DNA (1095bp) protein (365aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Pseudouridine synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B0_ACIDE
RluA family pseudouridine synthase
OR_07102018_0_5m_scaffold_280_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9660..10400
DNA (741bp) protein (247aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B1_ACIDE
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
transcriptional regulator
OR_07102018_0_5m_scaffold_280_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10397..11968
DNA (1572bp) protein (524aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Pseudouridine synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B2_ACIDE
pseudouridine synthase
OR_07102018_0_5m_scaffold_280_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..12481
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B3_ACIDE
OR_07102018_0_5m_scaffold_280_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12566..13687
DNA (1122bp) protein (374aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B4_ACIDE
radical SAM protein
OR_07102018_0_5m_scaffold_280_13

Not on your lists

13714..14547
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99123.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type IV pilus biogenesis/stability protein PilW
OR_07102018_0_5m_scaffold_280_14

Not on your lists

14597..15496
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DM48_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99122.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
OR_07102018_0_5m_scaffold_280_15

Not on your lists

15496..16776
DNA (1281bp) protein (427aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=uncultured bacterium RepID=K2EGM6_9BACT
OR_07102018_0_5m_scaffold_280_16

Not on your lists


16888..18189
DNA (1302bp) protein (434aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hisS; histidyl-tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2DV21_9BACT
OR_07102018_0_5m_scaffold_280_17

Not on your lists

18204..18890
DNA (687bp) protein (229aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DHV1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97612.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
OR_07102018_0_5m_scaffold_280_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18887..20053
DNA (1167bp) protein (389aa)
Outer membrane protein assembly factor BamB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C0_ACIDE
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Pyrrolo-quinoline quinone
OR_07102018_0_5m_scaffold_280_19

Not on your lists

20067..21410
DNA (1344bp) protein (448aa)
GTPase Der n=1 Tax=uncultured bacterium RepID=K2CYG0_9BACT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GTP-binding protein Der
OR_07102018_0_5m_scaffold_280_20

Not on your lists

21518..21775
DNA (258bp) protein (86aa)
RNA-binding protein Hfq n=1 Tax=uncultured bacterium RepID=K2EHU7_9BACT
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA chaperone Hfq
OR_07102018_0_5m_scaffold_280_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21782..23011
DNA (1230bp) protein (410aa)
GTPase HflX n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C3_ACIDE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
GTP-binding protein HflX
OR_07102018_0_5m_scaffold_280_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23065..24426
DNA (1362bp) protein (454aa)
HflK protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C4_ACIDE
HflK protein {ECO:0000313|EMBL:EER60683.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
HflK protein
OR_07102018_0_5m_scaffold_280_23

Not on your lists

24436..25344
DNA (909bp) protein (303aa)
Protein HflC n=1 Tax=uncultured bacterium RepID=K2DXS5_9BACT
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HflC protein
OR_07102018_0_5m_scaffold_280_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25641..26819
DNA (1179bp) protein (393aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C7_ACIDE
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
class II tRNA synthetase
OR_07102018_0_5m_scaffold_280_25

Not on your lists

26816..28189
DNA (1374bp) protein (458aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=uncultured bacterium RepID=K2CYS9_9BACT
OR_07102018_0_5m_scaffold_280_26

Not on your lists

28242..28664
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLS6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98141.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphoribosyltransferase
Displaying 26 items

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