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OR_07102018_0_5m_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07102018_0_5m_scaffold_413_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1032
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T346_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61069.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
OR_07102018_0_5m_scaffold_413_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1069..1689
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Acidovorax sp. CF316 RepID=J0KEK0_9BURK
OR_07102018_0_5m_scaffold_413_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..1909
DNA (204bp) protein (68aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=5 Tax=Bacteria RepID=K0HY21_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
OR_07102018_0_5m_scaffold_413_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2005..4284
DNA (2280bp) protein (760aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:EER61072.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EER61072.1};; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T349_ACIDE
(p)ppGpp synthetase I SpoT/RelA
OR_07102018_0_5m_scaffold_413_5

Not on your lists

comp(4317..4886)
DNA (570bp) protein (190aa)
Transcription elongation factor GreB n=1 Tax=uncultured bacterium RepID=K2DN61_9BACT
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Kelongation factor GreB
OR_07102018_0_5m_scaffold_413_trna_2
unknown

Not on your lists

comp(4969..5042)
DNA (74bp)
transferRNA Arg
OR_07102018_0_5m_scaffold_413_6
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6842
DNA (1350bp) protein (450aa)
Integrase family protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BFQ2_RALP1
recombinase XerD
Integrase family protein {ECO:0000313|EMBL:ACT05798.1}; TaxID=561229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
OR_07102018_0_5m_scaffold_413_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7514
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZE5_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62341.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
OR_07102018_0_5m_scaffold_413_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7511..8413
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4H8_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41153.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
OR_07102018_0_5m_scaffold_413_9
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8472..9179)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Pseudomonas syringae group genomosp. 3 RepID=UPI0001E28577
Uncharacterized protein {ECO:0000313|EMBL:EGH45729.1}; TaxID=629263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. pisi str. 1704B.;"
OR_07102018_0_5m_scaffold_413_10
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9176..9637)
DNA (462bp) protein (154aa)
endodeoxyribonuclease RusA n=1 Tax=Pseudomonas syringae group genomosp. 3 RepID=UPI0001E28578
Uncharacterized protein {ECO:0000313|EMBL:EGH45730.1}; TaxID=629263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. pisi str. 1704B.;"
OR_07102018_0_5m_scaffold_413_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9755..10750)
DNA (996bp) protein (332aa)
Site-specific recombinase, phage integrase family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X793_9BURK
Integrase {ECO:0000313|EMBL:KJA12448.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
integrase family protein
OR_07102018_0_5m_scaffold_413_12
unknown

Not on your lists

comp(10865..11215)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003767152
OR_07102018_0_5m_scaffold_413_13
unknown

Not on your lists

comp(11218..11580)
DNA (363bp) protein (121aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11806..12123)
DNA (318bp) protein (106aa)
Antidote-toxin recognition MazE domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XHI3_VARPD
antidote-toxin recognition MazE domain-containing protein
Antidote-toxin recognition MazE domain-containing protein {ECO:0000313|EMBL:AGU51804.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
OR_07102018_0_5m_scaffold_413_15
unknown

Not on your lists

12189..12428
DNA (240bp) protein (80aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12463..14586)
DNA (2124bp) protein (708aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000360D9CB
UvrD/REP helicase
OR_07102018_0_5m_scaffold_413_17
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14614..16326)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YFF0_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK53079.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
OR_07102018_0_5m_scaffold_413_18
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16349..19465)
DNA (3117bp) protein (1039aa)
Helicase domain protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZMN6_THASP
helicase
Helicase domain protein {ECO:0000313|EMBL:ACK53080.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
OR_07102018_0_5m_scaffold_413_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19474..19659)
DNA (186bp) protein (62aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJQ1_9GAMM
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EIL87442.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative DNA methylase
OR_07102018_0_5m_scaffold_413_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19598..22222)
DNA (2625bp) protein (875aa)
Adenine specific DNA methylase n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LVP5_9XANT
DNA methylase {ECO:0000313|EMBL:KJA08935.1}; Flags: Fragment;; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Adenine specific DNA methylase
OR_07102018_0_5m_scaffold_413_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22224..25241)
DNA (3018bp) protein (1006aa)
Type III restriction enzyme, res subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I2_9GAMM
Restriction endonuclease {ECO:0000313|EMBL:KJA08937.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
type III restriction enzyme, res subunit
OR_07102018_0_5m_scaffold_413_22
unknown

Not on your lists

comp(25427..26260)
DNA (834bp) protein (278aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_23
unknown

Not on your lists

comp(26265..26969)
DNA (705bp) protein (235aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_24
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27380..27604
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACA5
Helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIL64731.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
OR_07102018_0_5m_scaffold_413_25
unknown

Not on your lists

27777..28805
DNA (1029bp) protein (343aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_26
unknown

Not on your lists

comp(28818..29999)
DNA (1182bp) protein (394aa)

This feature has no annotations

OR_07102018_0_5m_scaffold_413_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30671..31675)
DNA (1005bp) protein (335aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T351_ACIDE
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hrcA; heat-inducible transcription repressor
OR_07102018_0_5m_scaffold_413_28

Not on your lists

31704..32600
DNA (897bp) protein (299aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23)
Uncharacterized protein (Fragment) n=2 Tax=uncultured bacterium RepID=K2DKM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97841.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
OR_07102018_0_5m_scaffold_413_29
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32603..34267
DNA (1665bp) protein (555aa)
DNA repair protein RecN n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T365_ACIDE
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
DNA repair protein RecN
Displaying items 1-30 of 42 in total

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