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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 701-750 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_3921
Species: Thiomonas intermedia (80%)
5 2646 bp 63.95 6.63 84.58
OR_07102018_0_5m_scaffold_12125
Species: Thiomonas intermedia (100%)
1 1263 bp 62.63 6.06 84.56
OR_07102018_0_5m_scaffold_8139
Species: Thiomonas intermedia (50%)
2 1618 bp 53.77 5.56 84.55
OR_07102018_0_5m_scaffold_1717
Genus: Thiomonas (100%)
6 5074 bp 58.73 5.44 84.43
OR_07102018_0_5m_scaffold_7967
Genus: Thiomonas (50%)
4 1640 bp 59.76 5.95 84.33
OR_07102018_0_5m_scaffold_5925
Species: Thiomonas intermedia (75%)
4 1982 bp 62.36 4.84 84.31
OR_07102018_0_5m_scaffold_2600
Species: Thiomonas arsenitoxydans (60%)
5 3619 bp 64.74 6.01 84.31
OR_07102018_0_5m_scaffold_5440
Species: Thiomonas arsenitoxydans (60%)
5 2091 bp 60.83 5.81 84.12
OR_07102018_0_5m_scaffold_12592
Species: Thiomonas sp. CB2 (66.67%)
3 1234 bp 50.57 9.12 84.12
OR_07102018_0_5m_scaffold_6284
Species: Thiomonas intermedia (100%)
3 1903 bp 64.63 5.44 84.03
OR_07102018_0_5m_scaffold_8542
Species: Thiomonas intermedia (50%)
2 1565 bp 64.54 5.46 83.96
OR_07102018_0_5m_scaffold_5633
Genus: Thiomonas (60%)
5 2046 bp 61.83 3.59 83.87
OR_07102018_0_5m_scaffold_1398
Genus: Thiomonas (83.33%)
6 6051 bp 62.75 4.36 83.79
OR_07102018_0_5m_scaffold_1303
Genus: Thiomonas (50%)
10 6434 bp 63.41 5.81 83.66
OR_07102018_0_5m_scaffold_1840
Genus: Thiomonas (71.43%)
7 4806 bp 62.90 5.24 83.65
OR_07102018_0_5m_scaffold_6158
Species: Thiomonas intermedia (100%)
2 1930 bp 63.73 6.45 83.63
OR_07102018_0_5m_scaffold_6778
Species: Thiomonas sp. CB2 (100%)
1 1817 bp 66.26 5.61 83.54
OR_07102018_0_5m_scaffold_4469
Genus: Thiomonas (50%)
4 2394 bp 63.95 5.14 83.33
OR_07102018_0_5m_scaffold_2857
Genus: Thiomonas (100%)
3 3344 bp 62.11 5.79 83.25
OR_07102018_0_5m_scaffold_9781
Species: Thiomonas sp. CB2 (50%)
2 1438 bp 67.59 4.38 83.24
OR_07102018_0_5m_scaffold_3084
Species: Thiomonas sp. CB2 (50%)
4 3169 bp 66.61 4.92 83.21
OR_07102018_0_5m_scaffold_2343
Species: Thiomonas intermedia (50%)
6 3955 bp 67.86 5.73 83.14
OR_07102018_0_5m_scaffold_3471
Species: Thiomonas intermedia (75%)
4 2905 bp 60.41 6.45 83.13
OR_07102018_0_5m_scaffold_17130
Species: Thiomonas intermedia (50%)
2 1019 bp 65.55 6.18 83.02
OR_07102018_0_5m_scaffold_10688
Species: Thiomonas arsenitoxydans (50%)
2 1363 bp 62.51 5.06 82.98
OR_07102018_0_5m_scaffold_4706
Species: Thiomonas intermedia (75%)
4 2314 bp 59.68 5.19 82.97
OR_07102018_0_5m_scaffold_4556
Species: Thiomonas sp. CB2 (66.67%)
3 2366 bp 57.35 5.07 82.92
OR_07102018_0_5m_scaffold_7559
Species: Thiomonas sp. CB2 (66.67%)
3 1693 bp 65.33 5.40 82.75
OR_07102018_0_5m_scaffold_8826
Species: Thiomonas intermedia (100%)
2 1531 bp 65.19 5.00 82.69
OR_07102018_0_5m_scaffold_17214
Species: Thiomonas sp. CB2 (100%)
2 1016 bp 62.99 4.28 82.38
OR_07102018_0_5m_scaffold_9339
Species: Thiomonas arsenitoxydans (50%)
2 1481 bp 62.86 6.38 82.24
OR_07102018_0_5m_scaffold_4069
Genus: Thiomonas (100%)
5 2568 bp 58.33 5.61 82.13
OR_07102018_0_5m_scaffold_1355
Species: Thiomonas intermedia (66.67%)
6 6197 bp 60.98 5.79 81.81
OR_07102018_0_5m_scaffold_3464
Species: Thiomonas arsenitoxydans (66.67%)
3 2909 bp 37.88 4.07 81.68
OR_07102018_0_5m_scaffold_6253
Species: Thiomonas intermedia (100%)
2 1910 bp 67.02 4.24 81.52
OR_07102018_0_5m_scaffold_15402
Species: Thiomonas arsenitoxydans (100%)
2 1090 bp 64.22 5.64 81.47
OR_07102018_0_5m_scaffold_7107
Species: Thiomonas sp. CB2 (100%)
1 1761 bp 67.46 5.20 81.43
OR_07102018_0_5m_scaffold_7954
Species: Thiomonas intermedia (100%)
1 1641 bp 61.79 5.85 81.35
OR_07102018_0_5m_scaffold_4107
Genus: Thiomonas (100%)
3 2549 bp 55.32 4.83 81.33
OR_07102018_0_5m_scaffold_8118
Species: Thiomonas sp. CB2 (50%)
2 1621 bp 65.39 4.53 80.88
OR_07102018_0_5m_scaffold_3075
Genus: Thiomonas (50%)
6 3174 bp 61.72 5.10 80.72
OR_07102018_0_5m_scaffold_4460
Species: Thiomonas sp. CB2 (75%)
4 2396 bp 61.44 5.76 80.47
OR_07102018_0_5m_scaffold_1229
Species: Thiomonas arsenitoxydans (55.56%)
9 6770 bp 61.02 5.14 80.25
OR_07102018_0_5m_scaffold_2209
Species: Thiomonas intermedia (50%)
4 4132 bp 63.96 5.37 80.23
OR_07102018_0_5m_scaffold_12829
Species: Thiomonas intermedia (50%)
2 1220 bp 61.72 4.80 80.16
OR_07102018_0_5m_scaffold_6983
Species: Thiomonas intermedia (50%)
4 1780 bp 62.25 5.14 80.06
OR_07102018_0_5m_scaffold_4757
Species: Thiomonas sp. CB2 (50%)
4 2297 bp 58.12 5.88 79.80
OR_07102018_0_5m_scaffold_3252
Species: Thiomonas intermedia (66.67%)
6 3860 bp 65.13 5.91 79.66
OR_07102018_0_5m_scaffold_16691
Species: Thiomonas intermedia (100%)
1 1036 bp 65.54 3.62 79.34
OR_07102018_0_5m_scaffold_5613
Species: Thiomonas intermedia (50%)
2 2049 bp 61.44 4.83 79.06
Displaying items 701-750 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.