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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m | Thiomonas | mine_tailing_impoundment_time_series | SOB_across_mines

Consensus taxonomy: Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: OR_07102018_0_5m_UNK

Properties

Avg. coverage: 5.42 Longest contig: 14.90 Kbp Bin length: 2.15 Mbp GC content: 64.32 %

Contigs count: 813 Features count: 2750 rRNAs count: 0 tRNAs count: 18

Genome completeness

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38

Displaying items 801-813 of 813 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
OR_07102018_0_5m_scaffold_9596 Species: Thiomonas intermedia (50%)	2	1457 bp	60.47	6.38	65.48
OR_07102018_0_5m_scaffold_12309 Species: Thiomonas intermedia (66.67%)	3	1251 bp	56.91	4.08	64.27
OR_07102018_0_5m_scaffold_12642 Genus: Thiomonas (66.67%)	3	1231 bp	59.87	5.48	62.88
OR_07102018_0_5m_scaffold_10455 Genus: Thiomonas (66.67%)	3	2721 bp	59.83	5.07	61.85
OR_07102018_0_5m_scaffold_2004 Genus: Thiomonas (50%)	6	4503 bp	55.79	6.93	61.83
OR_07102018_0_5m_scaffold_13743 Species: Thiomonas intermedia (100%)	1	1170 bp	61.20	4.87	60.00
OR_07102018_0_5m_scaffold_14109 Species: Thiomonas arsenitoxydans (50%)	2	1151 bp	59.69	4.56	59.95
OR_07102018_0_5m_scaffold_14194 Species: Thiomonas arsenitoxydans (50%)	2	1148 bp	59.49	4.18	57.49
OR_07102018_0_5m_scaffold_15237 Species: Thiomonas intermedia (50%)	2	1098 bp	52.82	3.28	57.10
OR_07102018_0_5m_scaffold_8320 Species: Thiomonas sp. CB2 (50%)	2	1595 bp	53.48	4.80	50.60
OR_07102018_0_5m_scaffold_6845 Species: Thiomonas intermedia (100%)	1	1804 bp	59.87	4.57	46.56
OR_07102018_0_5m_scaffold_10176 Species: Thiomonas intermedia (100%)	2	1406 bp	64.72	5.01	46.30
OR_07102018_0_5m_scaffold_11278 Species: Thiomonas arsenitoxydans (50%)	2	1318 bp	67.00	4.89	33.69

Displaying items 801-813 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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