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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_1792
Genus: Thiomonas (85.71%)
7 4918 bp 62.53 5.15 89.79
OR_07102018_0_5m_scaffold_8838
Species: Thiomonas arsenitoxydans (50%)
2 1530 bp 63.66 4.71 89.80
OR_07102018_0_5m_scaffold_6544
Species: Thiomonas intermedia (100%)
2 1858 bp 63.62 6.94 89.94
OR_07102018_0_5m_scaffold_8799
Species: Thiomonas arsenitoxydans (66.67%)
3 1534 bp 64.15 6.06 89.96
OR_07102018_0_5m_scaffold_2014
Species: Thiomonas sp. CB2 (60%)
5 4482 bp 61.94 5.25 90.03
OR_07102018_0_5m_scaffold_1170
Species: Thiomonas arsenitoxydans (57.14%)
7 7111 bp 62.44 4.77 90.07
OR_07102018_0_5m_scaffold_1166
Species: Thiomonas intermedia (62.5%)
8 7125 bp 63.09 5.22 90.15
OR_07102018_0_5m_scaffold_2864
Species: Thiomonas arsenitoxydans (100%)
2 3334 bp 63.68 5.71 90.16
OR_07102018_0_5m_scaffold_2898
Species: Thiomonas intermedia (50%)
4 3306 bp 57.68 5.63 90.29
OR_07102018_0_5m_scaffold_7885
Species: Thiomonas sp. CB2 (50%)
2 1651 bp 63.78 6.27 90.31
OR_07102018_0_5m_scaffold_1910
Species: Thiomonas sp. CB2 (50%)
4 4673 bp 64.35 5.46 90.33
OR_07102018_0_5m_scaffold_8171
Species: Thiomonas arsenitoxydans (66.67%)
3 1614 bp 64.93 5.76 90.33
OR_07102018_0_5m_scaffold_4059
Genus: Thiomonas (100%)
3 2573 bp 62.15 5.65 90.36
OR_07102018_0_5m_scaffold_10083
Species: Thiomonas sp. CB2 (100%)
3 1414 bp 65.70 6.36 90.38
OR_07102018_0_5m_scaffold_1687
Species: Thiomonas intermedia (50%)
6 5148 bp 65.73 6.61 90.38
OR_07102018_0_5m_scaffold_15981
Species: Thiomonas arsenitoxydans (66.67%)
3 1065 bp 61.69 4.51 90.42
OR_07102018_0_5m_scaffold_1706
Genus: Thiomonas (100%)
9 5109 bp 60.91 5.61 90.49
OR_07102018_0_5m_scaffold_6296
Species: Thiomonas arsenitoxydans (50%)
2 1901 bp 64.86 5.52 90.58
OR_07102018_0_5m_scaffold_9281
Species: Thiomonas sp. CB2 (50%)
2 1487 bp 62.68 6.46 90.59
OR_07102018_0_5m_scaffold_1865
Species: Thiomonas sp. CB2 (50%)
6 4764 bp 62.26 5.79 90.62
OR_07102018_0_5m_scaffold_13451
Species: Thiomonas sp. CB2 (100%)
1 1185 bp 64.56 8.10 90.63
OR_07102018_0_5m_scaffold_1822
Genus: Thiomonas (100%)
7 4849 bp 66.32 6.06 90.64
OR_07102018_0_5m_scaffold_2788
Species: Thiomonas intermedia (75%)
4 3412 bp 65.86 6.29 90.65
OR_07102018_0_5m_scaffold_2261
Species: Thiomonas arsenitoxydans (60%)
5 4065 bp 63.99 5.90 90.70
OR_07102018_0_5m_scaffold_4857
Species: Thiomonas intermedia (50%)
2 2259 bp 67.55 7.04 90.70
OR_07102018_0_5m_scaffold_4786
Genus: Thiomonas (66.67%)
3 2282 bp 68.49 5.19 90.71
OR_07102018_0_5m_scaffold_3469
Genus: Thiomonas (50%)
4 2907 bp 61.99 5.62 90.71
OR_07102018_0_5m_scaffold_2664
Genus: Thiomonas (100%)
5 3545 bp 63.61 5.75 90.72
OR_07102018_0_5m_scaffold_2466
Genus: Thiomonas (100%)
6 3796 bp 60.88 5.10 90.73
OR_07102018_0_5m_scaffold_4675
Genus: Thiomonas (66.67%)
3 2321 bp 67.30 6.66 90.74
OR_07102018_0_5m_scaffold_10000
Species: Thiomonas intermedia (100%)
2 1421 bp 69.81 4.43 90.78
OR_07102018_0_5m_scaffold_14539
Species: Thiomonas intermedia (66.67%)
3 1130 bp 61.42 4.51 90.80
OR_07102018_0_5m_scaffold_2136
Species: Thiomonas intermedia (50%)
4 4255 bp 65.31 7.16 90.81
OR_07102018_0_5m_scaffold_4038
Genus: Thiomonas (100%)
3 2582 bp 67.16 4.76 90.86
OR_07102018_0_5m_scaffold_5624
Species: Thiomonas arsenitoxydans (100%)
2 2047 bp 63.41 4.10 90.86
OR_07102018_0_5m_scaffold_9703
Species: Thiomonas intermedia (66.67%)
3 1446 bp 63.00 3.73 90.87
OR_07102018_0_5m_scaffold_3102
Species: Thiomonas sp. CB2 (66.67%)
3 3156 bp 60.55 5.04 90.87
OR_07102018_0_5m_scaffold_7988
Genus: Thiomonas (100%)
3 1637 bp 68.42 5.77 90.90
OR_07102018_0_5m_scaffold_3852
Species: Thiomonas intermedia (66.67%)
3 2683 bp 63.06 5.42 90.91
OR_07102018_0_5m_scaffold_17201
Species: Thiomonas intermedia (100%)
3 1016 bp 64.86 4.13 90.94
OR_07102018_0_5m_scaffold_4060
Species: Thiomonas intermedia (50%)
2 2572 bp 66.91 6.18 90.98
OR_07102018_0_5m_scaffold_5608
Species: Thiomonas arsenitoxydans (66.67%)
3 2050 bp 61.90 5.12 91.02
OR_07102018_0_5m_scaffold_1322
Species: Thiomonas sp. CB2 (60%)
5 6383 bp 66.83 7.75 91.04
OR_07102018_0_5m_scaffold_5267
Species: Thiomonas sp. CB2 (50%)
2 2138 bp 61.88 5.61 91.07
OR_07102018_0_5m_scaffold_10651
Species: Thiomonas arsenitoxydans (100%)
2 1367 bp 63.86 4.50 91.08
OR_07102018_0_5m_scaffold_2514
Genus: Thiomonas (50%)
4 3725 bp 64.54 5.32 91.09
OR_07102018_0_5m_scaffold_1208
Genus: Thiomonas (71.43%)
7 6869 bp 64.29 4.87 91.11
OR_07102018_0_5m_scaffold_5824
Genus: Thiomonas (100%)
3 2006 bp 66.05 7.18 91.23
OR_07102018_0_5m_scaffold_2443
Genus: Thiomonas (80%)
5 3821 bp 64.22 5.50 91.23
OR_07102018_0_5m_scaffold_13855
Genus: Thiomonas (100%)
3 1164 bp 61.68 6.19 91.24
Displaying items 251-300 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.