ggKbase home page

OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_4065
Species: Thiomonas sp. CB2 (50%)
4 2570 bp 65.60 6.01 91.28
OR_07102018_0_5m_scaffold_8767
Species: Thiomonas intermedia (50%)
2 1538 bp 64.63 4.00 91.29
OR_07102018_0_5m_scaffold_1867
Genus: Thiomonas (100%)
7 4759 bp 64.87 5.30 91.34
OR_07102018_0_5m_scaffold_2288
Species: Thiomonas sp. CB2 (50%)
4 4033 bp 66.45 5.91 91.35
OR_07102018_0_5m_scaffold_990
Genus: Thiomonas (100%)
16 8303 bp 56.55 5.98 91.41
OR_07102018_0_5m_scaffold_1494
Species: Thiomonas sp. CB2 (50%)
6 5733 bp 63.86 4.60 91.42
OR_07102018_0_5m_scaffold_1708
Genus: Thiomonas (100%)
5 5108 bp 64.76 6.31 91.50
OR_07102018_0_5m_scaffold_6819
Species: Thiomonas intermedia (50%)
2 1809 bp 68.71 5.22 91.54
OR_07102018_0_5m_scaffold_2159
Genus: Thiomonas (100%)
6 4217 bp 66.47 5.05 91.56
OR_07102018_0_5m_scaffold_14865
Species: Thiomonas sp. CB2 (100%)
2 1114 bp 58.17 2.69 91.56
OR_07102018_0_5m_scaffold_2325
Species: Thiomonas intermedia (50%)
2 3984 bp 64.06 5.42 91.57
OR_07102018_0_5m_scaffold_3956
Species: Thiomonas intermedia (66.67%)
3 2624 bp 69.82 4.69 91.58
OR_07102018_0_5m_scaffold_9763
Species: Thiomonas intermedia (50%)
2 1441 bp 70.92 5.31 91.60
OR_07102018_0_5m_scaffold_11035
Species: Thiomonas sp. CB2 (100%)
1 1336 bp 64.22 5.61 91.62
OR_07102018_0_5m_scaffold_3936
Species: Thiomonas arsenitoxydans (50%)
4 2639 bp 67.83 5.97 91.63
OR_07102018_0_5m_scaffold_913
Genus: Thiomonas (100%)
9 8951 bp 65.72 6.69 91.63
OR_07102018_0_5m_scaffold_1333
Species: Thiomonas intermedia (75%)
8 6335 bp 64.83 4.74 91.63
OR_07102018_0_5m_scaffold_2001
Genus: Thiomonas (100%)
5 4504 bp 64.90 5.36 91.65
OR_07102018_0_5m_scaffold_3955
Species: Thiomonas arsenitoxydans (50%)
2 2624 bp 68.52 5.72 91.69
OR_07102018_0_5m_scaffold_6159
Species: Thiomonas arsenitoxydans (66.67%)
3 1930 bp 64.61 5.83 91.71
OR_07102018_0_5m_scaffold_6849
Species: Thiomonas intermedia (100%)
2 1804 bp 63.75 4.24 91.80
OR_07102018_0_5m_scaffold_1156
Species: Thiomonas arsenitoxydans (50%)
8 7175 bp 64.71 6.21 91.82
OR_07102018_0_5m_scaffold_6334
Species: Thiomonas sp. CB2 (100%)
2 1895 bp 69.02 5.70 91.82
OR_07102018_0_5m_scaffold_7943
Species: Thiomonas arsenitoxydans (66.67%)
3 1643 bp 66.10 4.20 91.84
OR_07102018_0_5m_scaffold_9289
Species: Thiomonas sp. CB2 (100%)
2 1486 bp 65.21 6.97 91.86
OR_07102018_0_5m_scaffold_11309
Species: Thiomonas sp. CB2 (66.67%)
3 1316 bp 58.51 5.02 91.87
OR_07102018_0_5m_scaffold_2690
Genus: Thiomonas (57.14%)
7 3512 bp 64.04 4.66 91.91
OR_07102018_0_5m_scaffold_2169
Species: Thiomonas sp. CB2 (50%)
8 6053 bp 63.90 6.20 91.94
OR_07102018_0_5m_scaffold_8372
Species: Thiomonas intermedia (50%)
2 1589 bp 59.97 4.25 91.94
OR_07102018_0_5m_scaffold_10789
Species: Thiomonas intermedia (50%)
2 1354 bp 64.70 4.99 91.95
OR_07102018_0_5m_scaffold_2823
Species: Thiomonas intermedia (60%)
5 3383 bp 65.33 5.28 91.96
OR_07102018_0_5m_scaffold_4625
Species: Thiomonas sp. CB2 (50%)
4 2342 bp 65.54 5.06 91.97
OR_07102018_0_5m_scaffold_7416
Species: Thiomonas intermedia (100%)
3 1712 bp 65.01 4.56 92.00
OR_07102018_0_5m_scaffold_2427
Species: Thiomonas intermedia (50%)
4 3847 bp 63.58 6.47 92.02
OR_07102018_0_5m_scaffold_952
Genus: Thiomonas (100%)
8 8561 bp 68.33 6.33 92.02
OR_07102018_0_5m_scaffold_2955
Species: Thiomonas sp. CB2 (50%)
2 3259 bp 66.40 5.71 92.05
OR_07102018_0_5m_scaffold_2447
Species: Thiomonas intermedia (50%)
4 3816 bp 61.84 5.19 92.14
OR_07102018_0_5m_scaffold_7395
Species: Thiomonas intermedia (50%)
2 1715 bp 66.41 4.99 92.19
OR_07102018_0_5m_scaffold_2473
Species: Thiomonas arsenitoxydans (50%)
4 3784 bp 61.84 5.55 92.28
OR_07102018_0_5m_scaffold_6250
Species: Thiomonas arsenitoxydans (75%)
4 1911 bp 65.20 6.75 92.31
OR_07102018_0_5m_scaffold_2167
Genus: Thiomonas (66.67%)
6 4205 bp 65.42 4.67 92.32
OR_07102018_0_5m_scaffold_5583
Genus: Thiomonas (100%)
3 2057 bp 63.15 5.98 92.32
OR_07102018_0_5m_scaffold_4869
Species: Thiomonas intermedia (80%)
5 2255 bp 62.00 6.98 92.33
OR_07102018_0_5m_scaffold_1380
Genus: Thiomonas (80%)
5 6105 bp 66.90 6.00 92.38
OR_07102018_0_5m_scaffold_13461
Species: Thiomonas intermedia (100%)
2 1185 bp 71.39 4.81 92.41
OR_07102018_0_5m_scaffold_6634
Species: Thiomonas sp. CB2 (75%)
4 1844 bp 65.29 5.21 92.41
OR_07102018_0_5m_scaffold_1015
Genus: Thiomonas (54.55%)
11 8105 bp 66.96 6.38 92.46
OR_07102018_0_5m_scaffold_8232
Species: Thiomonas sp. CB2 (50%)
2 1606 bp 66.38 6.44 92.47
OR_07102018_0_5m_scaffold_5724
Species: Thiomonas sp. CB2 (50%)
4 3989 bp 63.60 5.30 92.50
OR_07102018_0_5m_scaffold_1901
Species: Thiomonas intermedia (60%)
5 4694 bp 60.86 4.92 92.54
Displaying items 301-350 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.