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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_15613
Species: Thiomonas intermedia (50%)
2 1080 bp 66.94 4.44 97.22
OR_07102018_0_5m_scaffold_6065
Species: Thiomonas arsenitoxydans (100%)
2 1954 bp 68.58 6.68 97.19
OR_07102018_0_5m_scaffold_10479
Species: Thiomonas intermedia (100%)
2 1380 bp 66.16 4.89 97.17
OR_07102018_0_5m_scaffold_17208
Species: Thiomonas intermedia (50%)
2 1016 bp 62.70 5.46 97.15
OR_07102018_0_5m_scaffold_8474
Species: Thiomonas sp. CB2 (50%)
2 1575 bp 66.22 6.29 97.14
OR_07102018_0_5m_scaffold_4822
Species: Thiomonas sp. CB2 (66.67%)
3 2270 bp 68.59 4.56 97.14
OR_07102018_0_5m_scaffold_12366
Species: Thiomonas sp. CB2 (100%)
2 1248 bp 65.22 4.33 97.12
OR_07102018_0_5m_scaffold_2003
Genus: Thiomonas (57.14%)
7 4503 bp 59.43 3.70 97.09
OR_07102018_0_5m_scaffold_4342
Genus: Thiomonas (100%)
3 2448 bp 61.40 6.07 97.06
OR_07102018_0_5m_scaffold_1959
Species: Thiomonas arsenitoxydans (66.67%)
6 4595 bp 62.76 5.09 97.02
OR_07102018_0_5m_scaffold_1994
Species: Thiomonas arsenitoxydans (80%)
5 4518 bp 66.22 4.98 97.01
OR_07102018_0_5m_scaffold_4408
Species: Thiomonas sp. CB2 (66.67%)
3 2420 bp 64.46 5.52 96.94
OR_07102018_0_5m_scaffold_17606
Species: Thiomonas sp. CB2 (100%)
2 1003 bp 67.60 6.13 96.91
OR_07102018_0_5m_scaffold_1644
Species: Thiomonas intermedia (50%)
2 5263 bp 69.22 5.47 96.85
OR_07102018_0_5m_scaffold_4309
Genus: Thiomonas (100%)
3 2463 bp 65.73 5.60 96.83
OR_07102018_0_5m_scaffold_1426
Species: Thiomonas arsenitoxydans (57.14%)
7 5973 bp 64.47 5.40 96.79
OR_07102018_0_5m_scaffold_8182
Species: Thiomonas sp. CB2 (50%)
2 1612 bp 65.26 3.91 96.77
OR_07102018_0_5m_scaffold_2243
Genus: Thiomonas (80%)
5 4092 bp 68.04 6.23 96.77
OR_07102018_0_5m_scaffold_12187
Species: Thiomonas sp. CB2 (50%)
2 1259 bp 62.11 5.72 96.74
OR_07102018_0_5m_scaffold_9132
Species: Thiomonas sp. CB2 (50%)
2 1501 bp 63.16 5.40 96.74
OR_07102018_0_5m_scaffold_14956
Species: Thiomonas sp. CB2 (50%)
2 1111 bp 67.24 5.40 96.67
OR_07102018_0_5m_scaffold_3978
Species: Thiomonas sp. CB2 (50%)
2 2610 bp 65.36 6.55 96.67
OR_07102018_0_5m_scaffold_4545
Genus: Thiomonas (100%)
5 4032 bp 67.19 5.43 96.65
OR_07102018_0_5m_scaffold_16581
Species: Thiomonas intermedia (50%)
2 1040 bp 65.77 4.47 96.63
OR_07102018_0_5m_scaffold_11623
Species: Thiomonas intermedia (100%)
2 1295 bp 65.64 4.05 96.60
OR_07102018_0_5m_scaffold_2613
Species: Thiomonas arsenitoxydans (50%)
4 3606 bp 64.45 5.66 96.59
OR_07102018_0_5m_scaffold_4215
Species: Thiomonas arsenitoxydans (75%)
4 2507 bp 64.02 5.74 96.57
OR_07102018_0_5m_scaffold_2631
Species: Thiomonas sp. CB2 (50%)
4 3579 bp 65.10 5.20 96.56
OR_07102018_0_5m_scaffold_4685
Species: Thiomonas arsenitoxydans (50%)
4 2319 bp 62.96 4.59 96.51
OR_07102018_0_5m_scaffold_3216
Species: Thiomonas intermedia (100%)
3 3075 bp 63.48 6.39 96.49
OR_07102018_0_5m_scaffold_3438
Species: Thiomonas sp. CB2 (50%)
2 2929 bp 68.28 5.53 96.48
OR_07102018_0_5m_scaffold_13876
Species: Thiomonas sp. CB2 (50%)
2 1163 bp 60.71 4.39 96.47
OR_07102018_0_5m_scaffold_4672
Species: Thiomonas intermedia (100%)
3 2323 bp 64.87 5.29 96.47
OR_07102018_0_5m_scaffold_6887
Species: Thiomonas sp. CB2 (75%)
4 1798 bp 64.29 5.01 96.44
OR_07102018_0_5m_scaffold_3412
Species: Thiomonas arsenitoxydans (75%)
4 3949 bp 67.97 6.08 96.40
OR_07102018_0_5m_scaffold_4355
Species: Thiomonas intermedia (66.67%)
3 2444 bp 70.58 6.01 96.36
OR_07102018_0_5m_scaffold_3983
Species: Thiomonas arsenitoxydans (50%)
6 2606 bp 66.81 5.24 96.35
OR_07102018_0_5m_scaffold_9227
Species: Thiomonas intermedia (50%)
2 1492 bp 66.76 3.12 96.31
OR_07102018_0_5m_scaffold_1596
Genus: Thiomonas (60%)
5 5417 bp 67.18 5.82 96.31
OR_07102018_0_5m_scaffold_13418
Species: Thiomonas intermedia (66.67%)
3 1187 bp 69.08 5.94 96.29
OR_07102018_0_5m_scaffold_6267
Species: Thiomonas sp. CB2 (66.67%)
3 1907 bp 67.96 6.69 96.28
OR_07102018_0_5m_scaffold_3940
Genus: Thiomonas (75%)
4 2637 bp 65.53 6.03 96.25
OR_07102018_0_5m_scaffold_1698
Species: Thiomonas arsenitoxydans (50%)
4 5127 bp 65.55 5.82 96.20
OR_07102018_0_5m_scaffold_15768
Genus: Thiomonas (100%)
3 1073 bp 69.34 4.33 96.18
OR_07102018_0_5m_scaffold_11918
Species: Thiomonas arsenitoxydans (50%)
2 1276 bp 67.01 5.29 96.16
OR_07102018_0_5m_scaffold_6467
Species: Thiomonas sp. CB2 (50%)
2 1872 bp 67.90 7.93 96.15
OR_07102018_0_5m_scaffold_2561
Species: Thiomonas sp. CB2 (66.67%)
3 3664 bp 68.83 4.99 96.12
OR_07102018_0_5m_scaffold_2738
Species: Thiomonas intermedia (66.67%)
3 3462 bp 57.89 4.64 96.10
OR_07102018_0_5m_scaffold_7614
Species: Thiomonas intermedia (75%)
4 1686 bp 67.08 6.58 96.09
OR_07102018_0_5m_scaffold_2946
Species: Thiomonas intermedia (50%)
4 3266 bp 65.49 5.88 96.08
Displaying items 251-300 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.