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OR_07102018_0_5m_Thiomonas_64_5

In projects: OR_07102018_0_5m  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 401-450 of 813 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_1404
Species: Thiomonas intermedia (71.43%)
7 6038 bp 64.41 5.99 93.81
OR_07102018_0_5m_scaffold_1574
Species: Thiomonas intermedia (50%)
8 5486 bp 62.61 5.55 93.78
OR_07102018_0_5m_scaffold_13828
Species: Thiomonas intermedia (66.67%)
3 1165 bp 64.72 4.25 93.73
OR_07102018_0_5m_scaffold_3756
Genus: Thiomonas (100%)
5 2731 bp 54.82 5.38 93.70
OR_07102018_0_5m_scaffold_4234
Genus: Thiomonas (100%)
5 2498 bp 60.81 4.26 93.67
OR_07102018_0_5m_scaffold_4272
Species: Thiomonas sp. CB2 (66.67%)
3 2477 bp 66.86 6.36 93.62
OR_07102018_0_5m_scaffold_13385
Species: Thiomonas arsenitoxydans (50%)
2 1189 bp 63.92 4.92 93.61
OR_07102018_0_5m_scaffold_2240
Species: Thiomonas intermedia (50%)
6 4093 bp 63.03 5.79 93.60
OR_07102018_0_5m_scaffold_1674
Species: Thiomonas sp. CB2 (50%)
10 8404 bp 60.84 5.87 93.60
OR_07102018_0_5m_scaffold_1684
Species: Thiomonas sp. CB2 (50%)
6 5155 bp 59.92 5.30 93.58
OR_07102018_0_5m_scaffold_12175
Species: Thiomonas sp. CB2 (66.67%)
3 1260 bp 58.49 4.64 93.57
OR_07102018_0_5m_scaffold_916
Species: Thiomonas sp. CB2 (66.67%)
9 8920 bp 66.54 6.22 93.53
OR_07102018_0_5m_scaffold_3244
Genus: Thiomonas (80%)
5 3058 bp 61.38 4.91 93.49
OR_07102018_0_5m_scaffold_14435
Species: Thiomonas intermedia (100%)
3 1136 bp 63.38 4.75 93.49
OR_07102018_0_5m_scaffold_7720
Species: Thiomonas arsenitoxydans (66.67%)
3 1672 bp 64.83 5.47 93.48
OR_07102018_0_5m_scaffold_6915
Species: Thiomonas arsenitoxydans (100%)
3 1794 bp 63.43 3.76 93.48
OR_07102018_0_5m_scaffold_4369
Species: Thiomonas arsenitoxydans (60%)
5 2436 bp 60.22 5.11 93.47
OR_07102018_0_5m_scaffold_5099
Species: Thiomonas intermedia (66.67%)
3 2189 bp 60.03 5.55 93.47
OR_07102018_0_5m_scaffold_7400
Genus: Thiomonas (66.67%)
3 1714 bp 68.67 7.00 93.47
OR_07102018_0_5m_scaffold_10400
Species: Thiomonas intermedia (100%)
2 1387 bp 57.61 6.71 93.44
OR_07102018_0_5m_scaffold_2935
Species: Thiomonas sp. CB2 (66.67%)
3 3272 bp 69.59 6.05 93.43
OR_07102018_0_5m_scaffold_3358
Species: Thiomonas arsenitoxydans (100%)
3 2990 bp 65.28 5.87 93.41
OR_07102018_0_5m_scaffold_7155
Species: Thiomonas intermedia (75%)
4 1754 bp 64.20 4.19 93.39
OR_07102018_0_5m_scaffold_1462
Species: Thiomonas sp. CB2 (57.14%)
7 5867 bp 64.80 5.75 93.37
OR_07102018_0_5m_scaffold_8173
Genus: Thiomonas (66.67%)
3 1613 bp 64.48 5.39 93.37
OR_07102018_0_5m_scaffold_9105
Species: Thiomonas intermedia (100%)
2 1504 bp 65.43 4.89 93.35
OR_07102018_0_5m_scaffold_8698
Species: Thiomonas intermedia (66.67%)
3 1546 bp 66.24 4.56 93.34
OR_07102018_0_5m_scaffold_3380
Species: Thiomonas arsenitoxydans (75%)
4 2970 bp 68.69 6.11 93.33
OR_07102018_0_5m_scaffold_9953
Species: Thiomonas intermedia (50%)
2 1424 bp 63.76 5.37 93.33
OR_07102018_0_5m_scaffold_4363
Species: Thiomonas arsenitoxydans (50%)
2 2440 bp 57.91 6.02 93.32
OR_07102018_0_5m_scaffold_5220
Species: Thiomonas arsenitoxydans (100%)
3 2154 bp 65.27 4.87 93.31
OR_07102018_0_5m_scaffold_15055
Species: Thiomonas intermedia (100%)
1 1106 bp 67.18 3.80 93.31
OR_07102018_0_5m_scaffold_1255
Genus: Thiomonas (66.67%)
9 6644 bp 66.96 6.25 93.29
OR_07102018_0_5m_scaffold_941
Genus: Thiomonas (88.89%)
9 8652 bp 65.95 6.29 93.27
OR_07102018_0_5m_scaffold_3366
Species: Thiomonas intermedia (66.67%)
3 2982 bp 61.23 5.53 93.26
OR_07102018_0_5m_scaffold_9870
Species: Thiomonas sp. CB2 (50%)
2 1432 bp 59.64 5.34 93.23
OR_07102018_0_5m_scaffold_1150
Genus: Thiomonas (87.5%)
8 7230 bp 61.76 5.21 93.20
OR_07102018_0_5m_scaffold_7827
Species: Thiomonas intermedia (66.67%)
3 1658 bp 65.38 5.07 93.18
OR_07102018_0_5m_scaffold_7382
Species: Thiomonas arsenitoxydans (66.67%)
3 1716 bp 63.29 4.55 93.18
OR_07102018_0_5m_scaffold_10172
Species: Thiomonas intermedia (50%)
2 1407 bp 68.51 5.65 93.18
OR_07102018_0_5m_scaffold_3382
Species: Thiomonas intermedia (50%)
4 2969 bp 63.15 5.10 93.16
OR_07102018_0_5m_scaffold_11377
Species: Thiomonas arsenitoxydans (75%)
4 1311 bp 63.16 3.66 93.14
OR_07102018_0_5m_scaffold_1600
Genus: Thiomonas (50%)
4 5409 bp 64.78 6.21 93.12
OR_07102018_0_5m_scaffold_14790
Species: Thiomonas intermedia (66.67%)
3 1118 bp 61.00 3.76 93.11
OR_07102018_0_5m_scaffold_6473
Species: Thiomonas intermedia (50%)
4 1870 bp 63.53 5.29 93.05
OR_07102018_0_5m_scaffold_1459
Species: Thiomonas arsenitoxydans (100%)
1 5878 bp 64.92 5.41 93.04
OR_07102018_0_5m_scaffold_12568
Species: Thiomonas sp. CB2 (100%)
1 1235 bp 65.99 4.01 93.04
OR_07102018_0_5m_scaffold_2097
Genus: Thiomonas (85.71%)
7 4321 bp 63.39 5.00 93.03
OR_07102018_0_5m_scaffold_3769
Species: Thiomonas sp. CB2 (66.67%)
3 2722 bp 64.14 5.18 93.02
OR_07102018_0_5m_scaffold_4943
Species: Thiomonas sp. CB2 (66.67%)
3 2232 bp 63.53 5.24 93.01
Displaying items 401-450 of 813 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.