ggKbase home page

OR_07112018_10m_0_1um_scaffold_978

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_978_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
Single-stranded DNA-binding protein n=2 Tax=Alphaproteobacteria RepID=K9CL15_SPHYA
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
single-strand binding protein
OR_07112018_10m_0_1um_scaffold_978_2
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1097..3442)
DNA (2346bp) protein (782aa)
copper-translocating P-type ATPase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002883924
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADG10283.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
heavy metal translocating P-type ATPase
OR_07112018_10m_0_1um_scaffold_978_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3462..4346)
DNA (885bp) protein (295aa)
copper resistance protein CopD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDAF6
Copper resistance D {ECO:0000313|EMBL:KGB52638.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
copper resistance protein CopD
OR_07112018_10m_0_1um_scaffold_978_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4350..4733)
DNA (384bp) protein (128aa)
UPI0003D62428 related cluster n=1 Tax=unknown RepID=UPI0003D62428
copper resistance protein CopC
Tax=GWF1_Sphingomonadales_63_6_curated
OR_07112018_10m_0_1um_scaffold_978_5
unknown

Not on your lists

4853..5125
DNA (273bp) protein (91aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_978_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5131..5562
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288B2CD
Heavy metal resistance protein {ECO:0000313|EMBL:KIJ72443.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
heavy metal resistance protein
OR_07112018_10m_0_1um_scaffold_978_7
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5559..6140
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037BD1B0
FecI sigma-24 factor {ECO:0000313|EMBL:EQB29707.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
RNA polymerase ECF-type sigma factor
OR_07112018_10m_0_1um_scaffold_978_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6137..8017
DNA (1881bp) protein (627aa)
Copper-resistance , CopA family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1B9_9SPHN
Copper-resistance protein CopA {ECO:0000313|EMBL:KHS49631.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
copper-resistance protein CopA
OR_07112018_10m_0_1um_scaffold_978_9
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8014..9120
DNA (1107bp) protein (369aa)
UPI0003D65338 related cluster n=1 Tax=unknown RepID=UPI0003D65338
Copper resistance protein CopB {ECO:0000313|EMBL:KFL46262.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
copper resistance B
OR_07112018_10m_0_1um_scaffold_978_10
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9202..9603
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66736
Uncharacterized protein {ECO:0000313|EMBL:KHA65725.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_978_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9644..9874
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035F6A35
Uncharacterized protein {ECO:0000313|EMBL:KHA65748.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_978_12
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..10813)
DNA (819bp) protein (273aa)
UPI0003D66B56 related cluster n=1 Tax=unknown RepID=UPI0003D66B56
Chromosome segregation ATPase {ECO:0000313|EMBL:KKC24999.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
OR_07112018_10m_0_1um_scaffold_978_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10918..11364)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I1Q6_9SPHN
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
OR_07112018_10m_0_1um_scaffold_978_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11496..11708)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0H0E1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05598.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Displaying 14 items

View Taxonomy