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OR_07112018_10m_0_1um_scaffold_4644

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_4644_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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83..700
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AF00F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(697..1080)
DNA (384bp) protein (128aa)
Activator of HSP90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK6_NIAKG
activator of HSP90 ATPase 1 family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1304..2176
DNA (873bp) protein (291aa)
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI00035E858E
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RpoD subfamily RNA polymerase sigma-70 subunit
OR_07112018_10m_0_1um_scaffold_4644_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2182..2913)
DNA (732bp) protein (244aa)
alkyl hydroperoxide reductase n=1 Tax=Pedobacter agri RepID=UPI00029A0B19
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


3217..4092
DNA (876bp) protein (292aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


4187..4660
DNA (474bp) protein (158aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4743..5267
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5273..5539)
DNA (267bp) protein (89aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6445..7626
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003754693
DNA polymerase IV
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7685..8320
DNA (636bp) protein (212aa)
1-Cys peroxiredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL5_NIAKG
1-Cys peroxiredoxin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07112018_10m_0_1um_scaffold_4644_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8404..9153
DNA (750bp) protein (250aa)
amidohydrolase n=1 Tax=Spirosoma luteum RepID=UPI0003633F82
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

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