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OR_07112018_10m_0_1um_scaffold_3173

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07112018_10m_0_1um_scaffold_3173_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F4AF
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(720..974)
DNA (255bp) protein (85aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=QUEC_THIDA
ExsB ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1135..1785)
DNA (651bp) protein (217aa)
radical activating enzyme; K10026 queuosine biosynthesis protein QueE id=12494368 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
radical activating enzyme
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..2561)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003610CBD
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2568..2792)
DNA (225bp) protein (75aa)
Outer membrane protein, porin-associated lipoprotein id=1336258 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane protein, porin-associated lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2789..2971)
DNA (183bp) protein (61aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..4287)
DNA (1275bp) protein (425aa)
translocation protein TolB n=1 Tax=Thiobacillus denitrificans RepID=UPI0003779B92
tolB; translocation protein TolB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4356..5228)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003740A7C
TonB protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5225..5635)
DNA (411bp) protein (137aa)
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=12496614 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5639..6331)
DNA (693bp) protein (231aa)
protein tolQ n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707686
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6328..6744)
DNA (417bp) protein (139aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=12496612 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
4-hydroxybenzoyl-CoA thioesterase
Tax=GWE1_Thiobacillus_62_9_curated
OR_07112018_10m_0_1um_scaffold_3173_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6747..7736)
DNA (990bp) protein (330aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A38E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_13
unknown

Not on your lists

comp(7772..7879)
DNA (108bp) protein (36aa)

This feature has no annotations

OR_07112018_10m_0_1um_scaffold_3173_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..9147)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374B469
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9156..9689)
DNA (534bp) protein (178aa)
Holliday junction DNA helicase RuvA n=1 Tax=Thiobacillus denitrificans RepID=UPI000378BE3C
DNA recombination protein, RuvA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07112018_10m_0_1um_scaffold_3173_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..9945)
DNA (225bp) protein (75aa)
Holliday junction resolvase n=1 Tax=Thiobacillus thioparus RepID=UPI000382F26F
ruvC; Holliday junction resolvase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 16 items

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