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OR_07182017_21_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 585 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_21_scaffold_6_1
unknown

Not on your lists

417..1568
DNA (1152bp) protein (384aa)

This feature has no annotations

OR_07182017_21_scaffold_6_2
unknown

Not on your lists

1573..1965
DNA (393bp) protein (131aa)

This feature has no annotations

OR_07182017_21_scaffold_6_3
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

2161..2523
DNA (363bp) protein (121aa)
Transcriptional regulator, XRE family Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3ANQ1_CHLCH
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB27380.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
OR_07182017_21_scaffold_6_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2523..3833
DNA (1311bp) protein (437aa)
HipA domain protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICY3_FLUTR
HipA domain-containing protein
HipA domain protein {ECO:0000313|EMBL:AEA43357.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
OR_07182017_21_scaffold_6_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3830..4999)
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035C9823
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


5231..5674
DNA (444bp) protein (148aa)
50S ribosomal protein L13 Tax=Segetibacter koreensis RepID=UPI000375B0E6
50S ribosomal protein L13
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


5701..6090
DNA (390bp) protein (130aa)
30S ribosomal protein S9 Tax=Segetibacter koreensis RepID=UPI000376B685
30S ribosomal protein S9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


6174..7082
DNA (909bp) protein (303aa)
30S ribosomal protein S2 Tax=Segetibacter koreensis RepID=UPI00035DEB64
30S ribosomal protein S2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7248..8087
DNA (840bp) protein (280aa)
elongation factor Ts Tax=Segetibacter koreensis RepID=UPI00036F2FFF
elongation factor Ts
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_10
unknown

Not on your lists

8190..9185
DNA (996bp) protein (332aa)

This feature has no annotations

OR_07182017_21_scaffold_6_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9322..10431
DNA (1110bp) protein (370aa)
Glycoside hydrolase family 5 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD02_9SPHI
endoglucanase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10588..11685
DNA (1098bp) protein (366aa)
glycoside hydrolase Tax=Pedobacter agri RepID=UPI00029ACF77
glycoside hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_13
unknown

Not on your lists

comp(11707..12315)
DNA (609bp) protein (203aa)

This feature has no annotations

OR_07182017_21_scaffold_6_14
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12325..13560)
DNA (1236bp) protein (412aa)
Glycerophosphoryl diester phosphodiesterase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycerophosphoryl diester phosphodiesterase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
OR_07182017_21_scaffold_6_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13570..14328)
DNA (759bp) protein (253aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
OR_07182017_21_scaffold_6_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14379..15305)
DNA (927bp) protein (309aa)
Metallophosphoesterase Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QET1_SPILD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB41275.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
OR_07182017_21_scaffold_6_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15395..16111
DNA (717bp) protein (239aa)
Uridylate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG
uridylate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16169..17470
DNA (1302bp) protein (434aa)
Outer membrane efflux protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHA9_RUNSL
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17576..19957
DNA (2382bp) protein (794aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000362F3E9
Uncharacterized protein {ECO:0000313|EMBL:GAO42157.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
OR_07182017_21_scaffold_6_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19972..21129
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037B42A1
2-keto-4-methylthiobutyrate aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_21
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21174..21674)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FWT0_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA77211.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
OR_07182017_21_scaffold_6_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21778..22578)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV0_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22693..26274)
DNA (3582bp) protein (1194aa)
Acriflavin resistance protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV2_NIAKG
Copper transporter {ECO:0000313|EMBL:KIC96044.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acriflavin resistance protein
OR_07182017_21_scaffold_6_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26316..27506)
DNA (1191bp) protein (397aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D50DD
RND transporter {ECO:0000313|EMBL:KIC89731.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RND family efflux transporter MFP subunit
OR_07182017_21_scaffold_6_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27537..28880)
DNA (1344bp) protein (448aa)
Outer membrane efflux protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV4_NIAKG
outer membrane efflux protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28864..29499)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29650..30303
DNA (654bp) protein (218aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374D38B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30354..31445
DNA (1092bp) protein (364aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036FB96E
phosphoserine aminotransferase apoenzyme
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31467..32702
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036500A7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_6_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32713..33723
DNA (1011bp) protein (337aa)
Tetratricopeptide TPR_2 repeat-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41861.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying items 1-30 of 585 in total

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