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OR_07182017_21_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 212 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_21_scaffold_20_1
unknown

Not on your lists

3..197
DNA (195bp) protein (65aa)

This feature has no annotations

OR_07182017_21_scaffold_20_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


701..937
DNA (237bp) protein (79aa)
50S ribosomal protein L28 Tax=Segetibacter koreensis RepID=UPI00037F8A11
50S ribosomal protein L28
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


966..1148
DNA (183bp) protein (61aa)
50S ribosomal protein L33 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
50S ribosomal protein L33
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1151..1324
DNA (174bp) protein (58aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036BB272
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15249.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07182017_21_scaffold_20_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1431..2393
DNA (963bp) protein (321aa)
cell division protein FtsY Tax=Segetibacter koreensis RepID=UPI00037398D0
signal recognition particle-docking protein FtsY
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2413..2823
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRG0_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3051..3506)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036CDDC7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3640..4605
DNA (966bp) protein (322aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000364E7C3
geranyltranstransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4670..6343
DNA (1674bp) protein (558aa)
Amino acid permease-associated region Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRR0_HALH1
Amino acid transporter {ECO:0000313|EMBL:KIC90048.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
amino acid permease
OR_07182017_21_scaffold_20_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6398..7423
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036947A5
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7437..9644)
DNA (2208bp) protein (736aa)
TonB-dependent siderophore receptor Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAP2_CHIPD
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACU63006.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07182017_21_scaffold_20_12
unknown

Not on your lists

comp(10187..10360)
DNA (174bp) protein (58aa)

This feature has no annotations

OR_07182017_21_scaffold_20_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10392..11306
DNA (915bp) protein (305aa)
Bacterial peptide chain release factor 2 (BRF-2) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ19_NIAKG
peptide chain release factor 2 (bRF-2)
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07182017_21_scaffold_20_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11335..12531)
DNA (1197bp) protein (399aa)
Na(+)/H(+) antiporter NhaA Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH49_CHIPD
Na+/H+ antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07182017_21_scaffold_20_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12572..14221)
DNA (1650bp) protein (550aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036CE5D9
OstA family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14218..15228)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037961E5
Mammalian cell entry related domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15303..16232)
DNA (930bp) protein (310aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D44F6
cell wall hydrolase/autolysin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16309..19002
DNA (2694bp) protein (898aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037828E4
organic solvent tolerance protein OstA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19051..19803)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000371E96C
glycerol acyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19834..20535)
DNA (702bp) protein (234aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003688E20
uracil-DNA glycosylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_trna_1
unknown

Not on your lists

20644..20717
DNA (74bp)
transferRNA Arg
OR_07182017_21_scaffold_20_21
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21294..31610
DNA (10317bp) protein (3439aa)
Non-ribosomal peptide synthetase Tax=Flavobacteriales bacterium ALC-1 RepID=A8UNR3_9FLAO
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EDP70119.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
peptide synthetase
OR_07182017_21_scaffold_20_22
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31619..32362
DNA (744bp) protein (248aa)
4'-phosphopantetheinyl transferase Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG88_9SPHI
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:GAL64246.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
4'-phosphopantetheinyl transferase
OR_07182017_21_scaffold_20_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32577..34190
DNA (1614bp) protein (538aa)
Histidine ammonia-lyase Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERX4_EMTOG
histidine ammonia-lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34256..34777
DNA (522bp) protein (174aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34851..36593
DNA (1743bp) protein (581aa)
Glutamine--tRNA ligase Tax=Cesiribacter andamanensis AMV16 RepID=M7NY47_9BACT
glutaminyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

36596..37963
DNA (1368bp) protein (456aa)
tRNA(Ile)-lysidine synthase Tax=Niabella soli DSM 19437 RepID=H1NLY0_9SPHI
tRNA(Ile)-lysidine synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(37960..38598)
DNA (639bp) protein (213aa)
Rhomboid family protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG2_NIAKG
rhomboid family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07182017_21_scaffold_20_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38616..39089)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribosomal RNA large subunit methyltransferase H Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R6_NIAKG
ribosomal RNA large subunit methyltransferase H
OR_07182017_21_scaffold_20_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39241..39990
DNA (750bp) protein (250aa)
Thrombospondin type 3 repeat-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB61_NIAKG
thrombospondin type 3 repeat-containing protein
Thrombospondin type 3 repeat-containing protein {ECO:0000313|EMBL:AEW02444.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 212 in total

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