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OR_07232018_dam_0_1um_scaffold_493

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07232018_dam_0_1um_scaffold_493_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..533
DNA (531bp) protein (177aa)
Outer membrane efflux protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6E2_THIK1
Outer membrane efflux protein {ECO:0000313|EMBL:CDW94382.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
outer membrane efflux protein
OR_07232018_dam_0_1um_scaffold_493_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(573..1742)
DNA (1170bp) protein (390aa)
Putative Deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKU4_THIA3
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
OR_07232018_dam_0_1um_scaffold_493_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1739..2851)
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
3-dehydroquinate synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6E0_THIK1
3-dehydroquinate synthase
OR_07232018_dam_0_1um_scaffold_493_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2992..3504)
DNA (513bp) protein (171aa)
aroK; Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CAZ87560.1}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CAZ87560.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Shikimate kinase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKU2_THIA3
OR_07232018_dam_0_1um_scaffold_493_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4082..6325)
DNA (2244bp) protein (748aa)
Type IV pilus secretin PilQ n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D8_THIK1
Type IV pilus secretin PilQ {ECO:0000313|EMBL:CDW94391.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
type IV pilus secretin PilQ
OR_07232018_dam_0_1um_scaffold_493_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6322..6873)
DNA (552bp) protein (184aa)
Pilus assembly protein PilP n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D7_THIK1
Pilus assembly protein PilP
Pilus assembly protein PilP {ECO:0000313|EMBL:CDW94392.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
OR_07232018_dam_0_1um_scaffold_493_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6870..7553)
DNA (684bp) protein (228aa)
Pilus assembly protein PilO n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D6_THIK1
Pilus assembly protein PilO
Pilus assembly protein PilO {ECO:0000313|EMBL:ADG30063.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_493_8
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7562..8182)
DNA (621bp) protein (207aa)
Fimbrial assembly family protein n=2 Tax=Thiomonas RepID=D5X6D5_THIK1
Putative Type 4 fimbrial biogenesis protein PilN {ECO:0000313|EMBL:CDW94394.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
fimbrial assembly family protein
OR_07232018_dam_0_1um_scaffold_493_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8202..9281)
DNA (1080bp) protein (360aa)
Type IV pilus assembly protein PilM n=2 Tax=Thiomonas RepID=D5X6D4_THIK1
Putative Type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ADG30061.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_493_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..11994
DNA (2319bp) protein (773aa)
Penicillin-binding protein, 1A family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D3_THIK1
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ADG30060.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
penicillin-binding protein
OR_07232018_dam_0_1um_scaffold_493_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12032..12358)
DNA (327bp) protein (109aa)
Protein CyaY n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D2_THIK1
iron donor protein CyaY
Protein CyaY {ECO:0000256|HAMAP-Rule:MF_00142, ECO:0000256|SAAS:SAAS00020372}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
OR_07232018_dam_0_1um_scaffold_493_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..13867
DNA (1293bp) protein (431aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Diaminopimelate decarboxylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6D1_THIK1
diaminopimelate decarboxylase
OR_07232018_dam_0_1um_scaffold_493_13
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13840..14544)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKT2_THIA3
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
OR_07232018_dam_0_1um_scaffold_493_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14550..15308)
DNA (759bp) protein (253aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6C9_THIK1
oxidoreductase molybdopterin binding protein
Displaying 14 items

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