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OR_07232018_dam_0_1um_Thiomonas_64_8

In projects: OR_07232018_dam_0_1um  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 226 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07232018_dam_0_1um_scaffold_207
Genus: Thiomonas (100%)
29 32078 bp 66.02 7.56 95.09
OR_07232018_dam_0_1um_scaffold_5048
Species: Thiomonas intermedia (66.67%)
3 2634 bp 62.53 7.52 85.31
OR_07232018_dam_0_1um_scaffold_2444
Species: Thiomonas intermedia (66.67%)
3 4377 bp 67.65 7.51 92.87
OR_07232018_dam_0_1um_scaffold_15518
Species: Thiomonas arsenitoxydans (50%)
2 1242 bp 66.10 7.49 98.79
OR_07232018_dam_0_1um_scaffold_1416
Genus: Thiomonas (85.71%)
7 6563 bp 65.72 7.43 95.03
OR_07232018_dam_0_1um_scaffold_4518
Species: Thiomonas intermedia (60%)
5 2833 bp 58.67 7.41 86.30
OR_07232018_dam_0_1um_scaffold_3331
Species: Thiomonas intermedia (60%)
5 5087 bp 62.30 7.40 94.18
OR_07232018_dam_0_1um_scaffold_3009
Species: Thiomonas arsenitoxydans (50%)
4 3778 bp 66.81 7.38 96.40
OR_07232018_dam_0_1um_scaffold_1199
Genus: Thiomonas (87.5%)
8 7309 bp 66.56 7.37 88.21
OR_07232018_dam_0_1um_scaffold_2228
Species: Thiomonas arsenitoxydans (71.43%)
7 4649 bp 60.98 7.36 88.21
OR_07232018_dam_0_1um_scaffold_1328
Species: Thiomonas arsenitoxydans (66.67%)
3 6828 bp 63.68 7.36 89.15
OR_07232018_dam_0_1um_scaffold_792
Genus: Thiomonas (100%)
14 11394 bp 66.34 7.33 93.36
OR_07232018_dam_0_1um_scaffold_529
Genus: Thiomonas (100%)
14 14283 bp 62.26 7.32 88.83
OR_07232018_dam_0_1um_scaffold_1014
Genus: Thiomonas (55.56%)
9 8351 bp 63.96 7.31 91.00
OR_07232018_dam_0_1um_scaffold_3942
Species: Thiomonas arsenitoxydans (60%)
5 3124 bp 64.60 7.30 89.69
OR_07232018_dam_0_1um_scaffold_693
Genus: Thiomonas (54.55%)
11 12501 bp 62.49 7.28 88.48
OR_07232018_dam_0_1um_scaffold_13874
Species: Thiomonas arsenitoxydans (50%)
2 1341 bp 63.01 7.27 98.43
OR_07232018_dam_0_1um_scaffold_2046
Species: Thiomonas sp. CB2 (50%)
4 4986 bp 62.49 7.25 89.11
OR_07232018_dam_0_1um_scaffold_6515
Species: Thiomonas arsenitoxydans (66.67%)
3 2216 bp 65.07 7.24 87.05
OR_07232018_dam_0_1um_scaffold_2914
Species: Thiomonas sp. CB2 (50%)
4 3852 bp 69.70 7.24 99.30
OR_07232018_dam_0_1um_scaffold_775
Genus: Thiomonas (72.73%)
11 12049 bp 67.31 7.21 89.31
OR_07232018_dam_0_1um_scaffold_11723
Species: Thiomonas arsenitoxydans (100%)
1 1501 bp 62.16 7.20 92.94
OR_07232018_dam_0_1um_scaffold_11743
Species: Thiomonas sp. CB2 (100%)
1 1500 bp 64.73 7.20 99.80
OR_07232018_dam_0_1um_scaffold_1270
Species: Thiomonas sp. CB2 (50%)
6 7032 bp 66.21 7.17 95.22
OR_07232018_dam_0_1um_scaffold_4005
Genus: Thiomonas (50%)
4 3087 bp 54.07 7.14 78.52
OR_07232018_dam_0_1um_scaffold_5664
Genus: Thiomonas (60%)
5 2440 bp 58.44 7.07 69.30
OR_07232018_dam_0_1um_scaffold_12705
Species: Thiomonas intermedia (50%)
2 1423 bp 66.55 7.06 90.23
OR_07232018_dam_0_1um_scaffold_480
Genus: Thiomonas (92.86%)
14 15655 bp 65.17 7.03 90.28
OR_07232018_dam_0_1um_scaffold_1386
Genus: Thiomonas (100%)
7 6665 bp 63.39 7.02 87.41
OR_07232018_dam_0_1um_scaffold_1001
Species: Thiomonas arsenitoxydans (55.56%)
9 8429 bp 67.84 7.01 92.86
OR_07232018_dam_0_1um_scaffold_11487
Species: Thiomonas sp. CB2 (66.67%)
3 1521 bp 65.15 7.00 86.39
OR_07232018_dam_0_1um_scaffold_6232
Species: Thiomonas intermedia (100%)
3 2275 bp 68.09 6.99 98.24
OR_07232018_dam_0_1um_scaffold_2341
Species: Thiomonas intermedia (75%)
4 4505 bp 66.53 6.99 98.89
OR_07232018_dam_0_1um_scaffold_1136
Species: Thiomonas intermedia (71.43%)
7 10048 bp 67.86 6.96 96.53
OR_07232018_dam_0_1um_scaffold_2306
Species: Thiomonas intermedia (50%)
6 4552 bp 63.33 6.95 96.62
OR_07232018_dam_0_1um_scaffold_19024
Species: Thiomonas arsenitoxydans (50%)
2 1080 bp 60.28 6.94 81.39
OR_07232018_dam_0_1um_scaffold_19510
Species: Thiomonas intermedia (100%)
2 1062 bp 71.00 6.92 94.35
OR_07232018_dam_0_1um_scaffold_3149
Species: Thiomonas intermedia (66.67%)
3 3647 bp 63.53 6.91 77.16
OR_07232018_dam_0_1um_scaffold_19936
Species: Thiomonas sp. CB2 (50%)
2 1047 bp 62.08 6.88 75.55
OR_07232018_dam_0_1um_scaffold_1932
Species: Thiomonas intermedia (55.56%)
9 7857 bp 68.03 6.85 93.05
OR_07232018_dam_0_1um_scaffold_16187
Species: Thiomonas intermedia (100%)
2 1207 bp 63.96 6.84 76.80
OR_07232018_dam_0_1um_scaffold_822
Genus: Thiomonas (100%)
5 9906 bp 67.37 6.80 95.09
OR_07232018_dam_0_1um_scaffold_1208
Genus: Thiomonas (62.5%)
8 7264 bp 70.70 6.71 99.49
OR_07232018_dam_0_1um_scaffold_691
Genus: Thiomonas (55.56%)
9 11521 bp 61.84 6.71 91.40
OR_07232018_dam_0_1um_scaffold_21317
Species: Thiomonas intermedia (100%)
1 1000 bp 62.80 6.60 94.80
OR_07232018_dam_0_1um_scaffold_8438
Genus: Thiomonas (100%)
3 1866 bp 63.56 6.59 92.60
OR_07232018_dam_0_1um_scaffold_2978
Species: Thiomonas intermedia (60%)
5 3801 bp 61.09 6.55 89.34
OR_07232018_dam_0_1um_scaffold_3104
Species: Thiomonas intermedia (66.67%)
3 3696 bp 67.67 6.49 94.97
OR_07232018_dam_0_1um_scaffold_18215
Species: Thiomonas intermedia (50%)
2 1111 bp 61.21 6.48 86.41
OR_07232018_dam_0_1um_scaffold_3147
Genus: Thiomonas (83.33%)
6 3651 bp 63.41 6.45 92.44
Displaying items 151-200 of 226 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.