ggKbase home page

OR_07232018_dam_0_1um_Thiomonas_64_8

In projects: OR_07232018_dam_0_1um  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 201-226 of 226 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07232018_dam_0_1um_scaffold_4203
Species: Thiomonas sp. CB2 (100%)
1 2984 bp 70.41 6.43 98.73
OR_07232018_dam_0_1um_scaffold_6292
Species: Thiomonas intermedia (57.14%)
7 4039 bp 64.10 6.35 95.44
OR_07232018_dam_0_1um_scaffold_11297
Species: Thiomonas arsenitoxydans (50%)
2 1538 bp 65.41 6.34 99.48
OR_07232018_dam_0_1um_scaffold_7031
Species: Thiomonas arsenitoxydans (50%)
4 3821 bp 67.16 6.32 97.67
OR_07232018_dam_0_1um_scaffold_2030
Species: Thiomonas arsenitoxydans (62.5%)
8 5016 bp 60.75 6.31 72.37
OR_07232018_dam_0_1um_scaffold_5081
Species: Thiomonas arsenitoxydans (50%)
4 2621 bp 64.59 6.12 76.76
OR_07232018_dam_0_1um_scaffold_3555
Genus: Thiomonas (60%)
5 3340 bp 61.95 6.11 87.40
OR_07232018_dam_0_1um_scaffold_15220
Species: Thiomonas intermedia (50%)
2 1258 bp 64.94 6.08 92.77
OR_07232018_dam_0_1um_scaffold_4865
Species: Thiomonas intermedia (100%)
4 2693 bp 67.73 6.07 79.21
OR_07232018_dam_0_1um_scaffold_12506
Species: Thiomonas sp. CB2 (100%)
3 1436 bp 65.04 6.06 92.34
OR_07232018_dam_0_1um_scaffold_12488
Species: Thiomonas sp. CB2 (100%)
3 1438 bp 58.28 6.05 69.68
OR_07232018_dam_0_1um_scaffold_6122
Species: Thiomonas arsenitoxydans (66.67%)
3 2302 bp 60.56 5.99 97.48
OR_07232018_dam_0_1um_scaffold_15564
Species: Thiomonas intermedia (66.67%)
3 1239 bp 57.79 5.93 82.32
OR_07232018_dam_0_1um_scaffold_9902
Species: Thiomonas arsenitoxydans (50%)
2 1674 bp 64.87 5.91 92.11
OR_07232018_dam_0_1um_scaffold_8267
Species: Thiomonas sp. CB2 (50%)
2 1893 bp 64.13 5.86 62.92
OR_07232018_dam_0_1um_scaffold_3632
Species: Thiomonas sp. CB2 (60%)
5 3303 bp 66.94 5.86 95.64
OR_07232018_dam_0_1um_scaffold_7708
Species: Thiomonas intermedia (50%)
2 1982 bp 65.84 5.83 101.56
OR_07232018_dam_0_1um_scaffold_4538
Species: Thiomonas sp. CB2 (66.67%)
3 2828 bp 63.15 5.83 86.56
OR_07232018_dam_0_1um_scaffold_11392
Species: Thiomonas arsenitoxydans (50%)
2 1529 bp 63.64 5.79 80.84
OR_07232018_dam_0_1um_scaffold_2130
Species: Thiomonas intermedia (50%)
4 4818 bp 56.48 5.64 99.00
OR_07232018_dam_0_1um_scaffold_19353
Species: Thiomonas intermedia (100%)
1 1068 bp 64.89 5.62 99.72
OR_07232018_dam_0_1um_scaffold_13842
Species: Thiomonas arsenitoxydans (100%)
1 1343 bp 63.37 5.58 99.85
OR_07232018_dam_0_1um_scaffold_8694
Species: Thiomonas intermedia (66.67%)
3 1829 bp 61.07 5.58 91.20
OR_07232018_dam_0_1um_scaffold_6936
Species: Thiomonas intermedia (66.67%)
3 2126 bp 61.29 5.57 80.86
OR_07232018_dam_0_1um_scaffold_7620
Species: Thiomonas sp. CB2 (50%)
2 1995 bp 67.07 5.56 90.23
OR_07232018_dam_0_1um_scaffold_7514
Species: Thiomonas arsenitoxydans (100%)
1 2014 bp 66.63 5.51 80.88
Displaying items 201-226 of 226 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.