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OR_07242016_12_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_57_1
unknown

Not on your lists

2..634
DNA (633bp) protein (211aa)

This feature has no annotations

OR_07242016_12_scaffold_57_2
unknown

Not on your lists

comp(821..1069)
DNA (249bp) protein (83aa)

This feature has no annotations

OR_07242016_12_scaffold_57_3
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1386..2438)
DNA (1053bp) protein (351aa)
Glycoside hydrolase family 45 (Fragment) bin=GWF2_Lentisphaerae_50_93 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=CG_Ignavi_01
OR_07242016_12_scaffold_57_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2768..3781
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC90816.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
OR_07242016_12_scaffold_57_5
unknown

Not on your lists

3966..4136
DNA (171bp) protein (57aa)

This feature has no annotations

OR_07242016_12_scaffold_57_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4167..4478
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDG4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_57_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4563..6287
DNA (1725bp) protein (575aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TVH6_MARTH
OR_07242016_12_scaffold_57_8
unknown

Not on your lists

comp(6391..6549)
DNA (159bp) protein (53aa)

This feature has no annotations

OR_07242016_12_scaffold_57_9
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6677..7261
DNA (585bp) protein (195aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000344AA39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY36387.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
OR_07242016_12_scaffold_57_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7300..7863)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035C99DE
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_57_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7872..8693)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036C4EF8
murQ; N-acetylmuramic acid 6-phosphate etherase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_57_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8703..9542)
DNA (840bp) protein (280aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037F8CF4
ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_57_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9791..11311
DNA (1521bp) protein (507aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003749ED0
carboxyl-terminal protease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_57_14
unknown

Not on your lists

11415..11639
DNA (225bp) protein (75aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003705756
OR_07242016_12_scaffold_57_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11742..12773)
DNA (1032bp) protein (344aa)
Regulatory protein GntR HTH Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPW7_NIAKG
regulatory protein GntR HTH
Regulatory protein GntR HTH {ECO:0000313|EMBL:AEV99961.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_57_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12954..14039
DNA (1086bp) protein (362aa)
sugar:proton symporter Tax=Cytophagales str. B6 RepID=UPI0003B4857D
rhamnose-proton symporter
Tax=CG_Paludi_01
OR_07242016_12_scaffold_57_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14067..16175
DNA (2109bp) protein (703aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:AEV99958.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEV99958.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPW4_NIAKG
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
OR_07242016_12_scaffold_57_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16138..16518
DNA (381bp) protein (127aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
L-rhamnose mutarotase Tax=Niabella soli DSM 19437 RepID=H1NP40_9SPHI
L-rhamnose mutarotase
OR_07242016_12_scaffold_57_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16542..17816
DNA (1275bp) protein (425aa)
sugar isomerase Tax=Niabella aurantiaca RepID=UPI000381AFA0
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEV99956.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_57_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17863..19254
DNA (1392bp) protein (464aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI000377F177
Carbohydrate kinase, FGGY
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:AEV99955.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_57_21
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19259..22111
DNA (2853bp) protein (951aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EV93_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK03596.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
OR_07242016_12_scaffold_57_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22150..23289
DNA (1140bp) protein (380aa)
Glycosyl hydrolase family 88 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPU4_NIAKG
glycosyl hydrolase family protein
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AEV99938.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_57_23
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

23475..24284
DNA (810bp) protein (270aa)
Tax=RBG_13_Aminicenantes_59_9_curated
OR_07242016_12_scaffold_57_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24445..24777
DNA (333bp) protein (111aa)
Putative uncharacterized protein Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T384_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79178.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
OR_07242016_12_scaffold_57_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24829..25839)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L772_HALH1
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE52148.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
OR_07242016_12_scaffold_57_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26045..27955
DNA (1911bp) protein (637aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000369B43A
alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:AHF14722.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_57_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28056..29324)
DNA (1269bp) protein (423aa)
Glycosyl hydrolase family 88 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH50_NIAKG
glycosyl hydrolase family protein
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AEW00661.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_57_28
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29357..31186)
DNA (1830bp) protein (610aa)
RagB/SusD domain-containing protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ41_HALH1
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEE53695.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
OR_07242016_12_scaffold_57_29
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31210..34428)
DNA (3219bp) protein (1073aa)
TonB-dependent receptor plug Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ42_HALH1
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEE53696.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
OR_07242016_12_scaffold_57_30
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34782..35924
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036D9E22
Uncharacterized protein {ECO:0000313|EMBL:ETZ23975.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
Displaying items 1-30 of 91 in total

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