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OR_07242016_12_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_156_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1..306
DNA (306bp) protein (102aa)
polynucleotide phosphorylase Tax=Segetibacter koreensis RepID=UPI00037B983D
Polyribonucleotide nucleotidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

360..1175
DNA (816bp) protein (272aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003735015
prmA; 50S ribosomal protein L11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1187..1903
DNA (717bp) protein (239aa)
Glycerol-3-phosphate acyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR59_NIAKG
Glycerol-3-phosphate acyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2021..2830
DNA (810bp) protein (270aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036F6D7B
peptidase M48 Ste24p
Tax=BJP_IG2103_Bacteroidetes_41_9
OR_07242016_12_scaffold_156_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2937..3743
DNA (807bp) protein (269aa)
Peptidase M48 Ste24p Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR58_NIAKG
Peptidase M48 {ECO:0000313|EMBL:KIC93947.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase M48 Ste24p
OR_07242016_12_scaffold_156_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3882..4547
DNA (666bp) protein (222aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035FC0AA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_7
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

4547..5071
DNA (525bp) protein (175aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00037B363D
adenylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
OR_07242016_12_scaffold_156_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5132..6853)
DNA (1722bp) protein (574aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C8A20
DNA primase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7303..8049
DNA (747bp) protein (249aa)
Transcriptional regulator, DeoR family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPX2_CHIPD
DeoR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_10
Microscilla sp. PRE1, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8166..8432
DNA (267bp) protein (89aa)
MS118, putative transposase Tax=Microscilla sp. PRE1 RepID=Q93PB3_9BACT
MS118, putative transposase {ECO:0000313|EMBL:AAK62840.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla sp. PRE1.;"
transposase IS200-family protein
OR_07242016_12_scaffold_156_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8633..9292)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003680CB8
Uncharacterized protein {ECO:0000313|EMBL:GAO43629.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
heat shock protein DnaJ domain-containing protein
OR_07242016_12_scaffold_156_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9298..9696)
DNA (399bp) protein (133aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003667690
anti-sigma-factor antagonist
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9789..12341
DNA (2553bp) protein (851aa)
ATPase AAA-2 domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
ATPase AAA-2 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12496..13056)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000376FC24
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13243..14898)
DNA (1656bp) protein (552aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037D21C4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15133..15519)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC93713.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OR_07242016_12_scaffold_156_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15677..16624)
DNA (948bp) protein (316aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036C43CA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16730..17389
DNA (660bp) protein (220aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036DCA39
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:AEW00626.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_156_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17391..19277
DNA (1887bp) protein (629aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003785165
Manganese transport protein mntH
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_20
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19282..19956)
DNA (675bp) protein (225aa)
lysophospholipase Tax=Marinilabilia salmonicolor RepID=UPI000299F5AC
Uncharacterized protein {ECO:0000313|EMBL:EDM37457.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
lysophospholipase
OR_07242016_12_scaffold_156_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20066..21298
DNA (1233bp) protein (411aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Isocitrate dehydrogenase [NADP] Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM91_CHIPD
isocitrate dehydrogenase
OR_07242016_12_scaffold_156_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21392..23047)
DNA (1656bp) protein (552aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP5_NIAKG
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23275..24534
DNA (1260bp) protein (420aa)
Glycine C-acetyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP6_NIAKG
Glycine C-acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24634..25476)
DNA (843bp) protein (281aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000367289D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25588..26487)
DNA (900bp) protein (300aa)
integrase Tax=Segetibacter koreensis RepID=UPI00035DD63D
Tyrosine recombinase xerC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26589..27086
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT1_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27095..27448)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036D8AD5
hypothetical protein
UPF0102 protein Niako_0418 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_156_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27578..28741
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361ED6F
mannose-6-phosphate isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28825..29394
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_156_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29497..29973)
DNA (477bp) protein (159aa)
RNaseH ribonuclease Tax=Segetibacter koreensis RepID=UPI000379F11E
RNase HI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 80 in total

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