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OR_07242016_12_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_209_1
unknown

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)

This feature has no annotations

OR_07242016_12_scaffold_209_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(986..1558)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036CF768
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00955.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_209_3
unknown

Not on your lists

1848..1982
DNA (135bp) protein (45aa)

This feature has no annotations

OR_07242016_12_scaffold_209_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1924..4509
DNA (2586bp) protein (862aa)
Uncharacterized protein Tax=Fibrella aestuarina BUZ 2 RepID=I0KHA2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03505.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
OR_07242016_12_scaffold_209_5
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4817..5491
DNA (675bp) protein (225aa)
Fatty acid hydroxylase Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EZ12_EMTOG
Fatty acid hydroxylase superfamily protein
Fatty acid hydroxylase superfamily protein {ECO:0000313|EMBL:AJW64419.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
OR_07242016_12_scaffold_209_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5748..6425
DNA (678bp) protein (226aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVB3_SOLCM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFD06171.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
OR_07242016_12_scaffold_209_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6422..7681
DNA (1260bp) protein (420aa)
Signal transduction histidine kinase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVB2_SOLCM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFD06170.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
OR_07242016_12_scaffold_209_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7689..8933
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Cytophagales str. B6 RepID=UPI0003B3EE45
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AEW00506.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_209_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8941..9870
DNA (930bp) protein (310aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003610977
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEW00505.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_209_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9881..12946
DNA (3066bp) protein (1022aa)
Acriflavin resistance protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER8_NIAKG
Acriflavin resistance protein {ECO:0000313|EMBL:AEW00504.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
acriflavin resistance protein
OR_07242016_12_scaffold_209_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12979..13998
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003730ADA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00503.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_209_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14070..15143)
DNA (1074bp) protein (358aa)
molecular chaperone DnaJ Tax=Segetibacter koreensis RepID=UPI00037F3AAD
chaperone protein dnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15669..17042
DNA (1374bp) protein (458aa)
SAM-dependent methyltransferase Tax=Segetibacter koreensis RepID=UPI00036170B8
PUA domain containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_14
unknown

Not on your lists

17070..17189
DNA (120bp) protein (40aa)

This feature has no annotations

OR_07242016_12_scaffold_209_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17133..17486)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC3_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17813..18286)
DNA (474bp) protein (158aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18443..19096)
DNA (654bp) protein (218aa)
3-oxoacid CoA-transferase, B subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ8_NIAKG
3-oxoacid CoA-transferase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19185..19877)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:ACU64364.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ACU64364.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
3-oxoacid CoA-transferase, A subunit Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD
3-oxoacid CoA-transferase subunit A
OR_07242016_12_scaffold_209_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19911..20276)
DNA (366bp) protein (122aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003808869
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20346..21269)
DNA (924bp) protein (308aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037F8AC1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21259..22458)
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AEW01349.1}; EC=6.3.2.5 {ECO:0000313|EMBL:AEW01349.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D0238
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
OR_07242016_12_scaffold_209_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22616..22960)
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit omega Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22929..23756)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E7F35
outer membrane assembly lipoprotein YfiO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(23994..25943)
DNA (1950bp) protein (650aa)
30S ribosomal protein S1 Tax=Segetibacter koreensis RepID=UPI00035FE542
RNA binding S1 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26341..27501)
DNA (1161bp) protein (387aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
mannonate dehydratase Tax=Niabella aurantiaca RepID=UPI000379EEF4
mannonate dehydratase
OR_07242016_12_scaffold_209_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27697..29370)
DNA (1674bp) protein (558aa)
SSS sodium solute transporter superfamily Tax=Niabella soli DSM 19437 PF3_9SPHI">RepID=H1NPF3_9SPHI
sodium transporter
Sodium transporter {ECO:0000313|EMBL:AHF15023.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_209_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29464..30957)
DNA (1494bp) protein (498aa)
arabinose isomerase Tax=Segetibacter koreensis RepID=UPI000382F0DB
L-arabinose isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_209_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30974..33013)
DNA (2040bp) protein (680aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036085DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97381.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_209_29
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33025..34146)
DNA (1122bp) protein (374aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036279CD
aldose epimerase
OR_07242016_12_scaffold_209_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34173..34874)
DNA (702bp) protein (234aa)
L-ribulose-5-phosphate 4-epimerase Tax=Cytophagales str. B6 RepID=UPI0003B60D11
araD; L-ribulose-5-phosphate 4-epimerase
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ACU61457.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 1-30 of 38 in total

View Taxonomy