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OR_07242016_12_scaffold_227

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_227_1
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(209..1429)
DNA (1221bp) protein (407aa)
Probable transposase Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=R7RU48_FLAPJ
recombinase
Probable transposase {ECO:0000313|EMBL:CDF59567.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;"
OR_07242016_12_scaffold_227_trna_1
unknown

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comp(1680..1753)
DNA (74bp)
transferRNA Asp
OR_07242016_12_scaffold_227_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2058..3038
DNA (981bp) protein (327aa)
acetyl-CoA carboxylase subunit alpha Tax=Segetibacter koreensis RepID=UPI0003723458
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3109..3987
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C9_NIAKG
dihydrodipicolinate synthase
OR_07242016_12_scaffold_227_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4103..5281
DNA (1179bp) protein (393aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI81_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00698.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_227_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5313..5975
DNA (663bp) protein (221aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00035D1906
Methyltransferase {ECO:0000313|EMBL:KIC94682.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
50S ribosomal protein L11
OR_07242016_12_scaffold_227_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6035..7684
DNA (1650bp) protein (550aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003630904
Sulfate permease {ECO:0000313|EMBL:KIC94620.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SulP family sulfate permease
OR_07242016_12_scaffold_227_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(7904..8302)
DNA (399bp) protein (133aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein bin=GWF2_OP9_related_35_9 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
OR_07242016_12_scaffold_227_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8306..10921)
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI79_NIAKG
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA mismatch repair protein MutS
OR_07242016_12_scaffold_227_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11125..12675)
DNA (1551bp) protein (517aa)
Peptidase M28 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQU4_EMTOG
peptidase M28
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12785..13297
DNA (513bp) protein (171aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036536DE
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEW00695.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_227_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13310..14230
DNA (921bp) protein (307aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AEW00694.1}; EC=2.5.1.- {ECO:0000313|EMBL:AEW00694.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-hydroxybenzoate octaprenyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI77_NIAKG
4-hydroxybenzoate octaprenyltransferase
OR_07242016_12_scaffold_227_12

Not on your lists

14310..14720
DNA (411bp) protein (137aa)
Holliday junction resolvase Tax=Niabella aurantiaca RepID=UPI0003716BB9
Marine sediment metagenome DNA, contig: S03H2_S12980 {ECO:0000313|EMBL:GAH66661.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Holliday junction resolvase
OR_07242016_12_scaffold_227_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14787..15365
DNA (579bp) protein (193aa)
Peptide deformylase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI75_NIAKG
peptide deformylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15365..16285
DNA (921bp) protein (307aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003798ED6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16343..17362)
DNA (1020bp) protein (340aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17419..19152)
DNA (1734bp) protein (578aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19154..19693)
DNA (540bp) protein (180aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI0003807D40
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19835..20944)
DNA (1110bp) protein (370aa)
Carboxylate-amine ligase Niako_0394 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQQ8_NIAKG
Carboxylate-amine ligase ybdK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21015..21968)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NTN2_9SPHI
glutathione synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22146..22979
DNA (834bp) protein (278aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037A5299
esterase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23129..26401)
DNA (3273bp) protein (1091aa)
OmpA-related protein Tax=Niabella soli DSM 19437 RepID=H1NRW7_9SPHI
cell envelope biogenesis protein OmpA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26599..29871)
DNA (3273bp) protein (1091aa)
Outer membrane receptor for ferrienterochelin and colicins Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AKA3_FLELS
Uncharacterized protein {ECO:0000313|EMBL:KIC91423.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane receptor for ferrienterochelin and colicins
OR_07242016_12_scaffold_227_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30048..31250
DNA (1203bp) protein (401aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Segetibacter koreensis RepID=UPI00037E28C7
GTP cyclohydrolase-2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_227_24
unknown

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31424..31498
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 25 items

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