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OR_07242016_12_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_272_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

OR_07242016_12_scaffold_272_2
unknown

Not on your lists

241..528
DNA (288bp) protein (96aa)

This feature has no annotations

OR_07242016_12_scaffold_272_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

652..3486
DNA (2835bp) protein (945aa)
TonB-dependent receptor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF40_NIAKG
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3964..4605
DNA (642bp) protein (214aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003719D5D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4664..5923
DNA (1260bp) protein (420aa)
Argininosuccinate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL80_NIAKG
argininosuccinate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5946..6281
DNA (336bp) protein (112aa)
Cupin 2 conserved barrel domain protein Tax=Niabella soli DSM 19437 RepID=H1NSH5_9SPHI
cupin
Cupin {ECO:0000313|EMBL:AHF15558.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_272_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6293..7321
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003690365
argC; N-acetyl-gamma-glutamyl-phosphate reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_8
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

7340..7573
DNA (234bp) protein (78aa)
S23 ribosomal protein Tax=Sphingobacterium sp. (strain 21) RepID=F4CCS0_SPHS2
S23 ribosomal protein
Tax=CG_CP01_01
OR_07242016_12_scaffold_272_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7716..8861
DNA (1146bp) protein (382aa)
Acetylornithine transaminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL81_NIAKG
Acetylornithine transaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8931..9902
DNA (972bp) protein (324aa)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:AEW01923.1}; EC=2.1.3.3 {ECO:0000313|EMBL:AEW01923.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
N-acetylornithine carbamoyltransferase Tax=Segetibacter koreensis RepID=UPI00035C548C
ornithine carbamoyltransferase
OR_07242016_12_scaffold_272_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9925..10773
DNA (849bp) protein (283aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetylglutamate kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL83_NIAKG
N-acetylglutamate kinase
OR_07242016_12_scaffold_272_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10736..11845
DNA (1110bp) protein (370aa)
Peptidase M20 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL84_NIAKG
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AEW01925.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_272_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11861..13201
DNA (1341bp) protein (447aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Argininosuccinate lyase Tax=Niabella soli DSM 19437 RepID=H1NQZ4_9SPHI
argininosuccinate lyase
OR_07242016_12_scaffold_272_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13352..14119
DNA (768bp) protein (256aa)
Peptidyl-prolyl cis-trans isomerase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIS7_RUNSL
FKBP-type peptidylprolyl isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14275..17088
DNA (2814bp) protein (938aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF43_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02663.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_272_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17425..18216)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF46_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIF34790.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
OR_07242016_12_scaffold_272_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18339..20069
DNA (1731bp) protein (577aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF47_NIAKG
integral membrane sensor signal transduction histidine kinase
OR_07242016_12_scaffold_272_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20066..20749
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF48_NIAKG
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW02668.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_272_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20906..22096
DNA (1191bp) protein (397aa)
2-amino-3-ketobutyrate coenzyme A ligase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL62_CHIPD
2-amino-3-ketobutyrate CoA ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_20

Not on your lists

22200..23051
DNA (852bp) protein (284aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000365F1FB
beta-lactamase
OR_07242016_12_scaffold_272_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23035..25158
DNA (2124bp) protein (708aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036DA8C9
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25195..26790
DNA (1596bp) protein (532aa)
L-aspartate oxidase Tax=Segetibacter koreensis RepID=UPI00037A175A
L-aspartate oxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26820..27725
DNA (906bp) protein (302aa)
Lipid A biosynthesis acyltransferase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP9_NIAKG
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW02902.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_272_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28508..28675
DNA (168bp) protein (56aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28727..30142)
DNA (1416bp) protein (472aa)
Beta-lactamase domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLA0_CHIPD
beta-lactamase domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30227..30562)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036188D9
ArsR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30678..31373)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000364E20A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31376..31999)
DNA (624bp) protein (208aa)
3-hydroxyacyl-CoA dehydrogenase domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP4_NIAKG
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEW02897.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_272_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32077..32463
DNA (387bp) protein (129aa)
Endoribonuclease L-PSP family protein Tax=Pedobacter sp. BAL39 RepID=A6EB10_9SPHI
endoribonuclease L-PSP
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_272_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32458..33402)
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Simonsiella muelleri ATCC 29453 RepID=V9HM79_9NEIS
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 34 in total

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