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OR_07242016_12_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_324_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

OR_07242016_12_scaffold_324_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(359..1066)
DNA (708bp) protein (236aa)
Abortive phage resistance protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVX0_HALH1
abortive phage resistance protein
Abortive phage resistance protein {ECO:0000313|EMBL:AEE53545.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
OR_07242016_12_scaffold_324_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1063..2376)
DNA (1314bp) protein (438aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHF5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49268.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
OR_07242016_12_scaffold_324_trna_6
unknown

Not on your lists

comp(2483..2553)
DNA (71bp)
transferRNA Gln
OR_07242016_12_scaffold_324_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2683..5397)
DNA (2715bp) protein (905aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035F19D9
cyanophycin synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5435..6325
DNA (891bp) protein (297aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003700405
cyanophycinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6456..7139
DNA (684bp) protein (228aa)
Lipolytic protein G-D-S-L family Tax=Niabella soli DSM 19437 RepID=H1NKV5_9SPHI
G-D-S-L family lipolytic protein
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:AHF14396.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_324_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7264..8049
DNA (786bp) protein (262aa)
axeA; putative carbohydrate esterase (EC:3.1.-.-)
Putative carbohydrate esterase {ECO:0000313|EMBL:CCH00874.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCH00874.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein Tax=Rudanella lutea RepID=UPI0003602DA8
OR_07242016_12_scaffold_324_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8633..9916)
DNA (1284bp) protein (428aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000369F42C
tyrosyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10183..10560
DNA (378bp) protein (126aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374D8BD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10917..12773
DNA (1857bp) protein (619aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000379192E
molecular chaperone
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13005..13706)
DNA (702bp) protein (234aa)
riboflavin synthase subunit alpha Tax=Segetibacter koreensis RepID=UPI00037F1178
riboflavin synthase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14015..14911
DNA (897bp) protein (299aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000364BF1F
Tyrosine recombinase xerC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15077..15376
DNA (300bp) protein (100aa)
Sigma-54 modulation protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E8_NIAKG
30S ribosomal protein S30 {ECO:0000313|EMBL:KIC90344.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
sigma-54 modulation protein
OR_07242016_12_scaffold_324_trna_1
unknown

Not on your lists

15893..15965
DNA (73bp)
transferRNA Thr
OR_07242016_12_scaffold_324_trna_2
unknown

Not on your lists

16046..16128
DNA (83bp)
transferRNA Tyr
OR_07242016_12_scaffold_324_trna_3
unknown

Not on your lists

16209..16281
DNA (73bp)
transferRNA Gly
OR_07242016_12_scaffold_324_trna_4
unknown

Not on your lists

16368..16439
DNA (72bp)
transferRNA Thr
OR_07242016_12_scaffold_324_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16641..17831
DNA (1191bp) protein (397aa)
elongation factor Tu Tax=Segetibacter koreensis RepID=UPI000378845C
translation elongation factor 1A (EF-1A/EF-Tu)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_trna_5
unknown

Not on your lists

17953..18024
DNA (72bp)
transferRNA Trp
OR_07242016_12_scaffold_324_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18135..18329
DNA (195bp) protein (65aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036590D7
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Preprotein translocase subunit SecE
OR_07242016_12_scaffold_324_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18336..18941
DNA (606bp) protein (202aa)
transcription antitermination protein NusG Tax=Segetibacter koreensis RepID=UPI00037098FC
transcription antitermination protein nusG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_17
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19091..19540
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPT5_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KIF31357.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
OR_07242016_12_scaffold_324_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


19856..20299
DNA (444bp) protein (148aa)
50S ribosomal protein L11 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


20324..21016
DNA (693bp) protein (231aa)
50S ribosomal protein L1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
rplA; 50S ribosomal protein L1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


21072..21587
DNA (516bp) protein (172aa)
50S ribosomal protein L10 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21796..22170
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 Tax=Niabella soli DSM 19437 RepID=H1NSW3_9SPHI
50S ribosomal protein L7
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_22
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22480..24504
DNA (2025bp) protein (675aa)
Putative metalloendopeptidase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNW7_SOLCM
putative metalloendopeptidase
Putative metalloendopeptidase {ECO:0000313|EMBL:AFD05378.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
OR_07242016_12_scaffold_324_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24896..28699
DNA (3804bp) protein (1268aa)
DNA-directed RNA polymerase subunit beta Tax=Segetibacter koreensis RepID=UPI0003755D57
DNA-directed RNA polymerase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_324_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28845..33110
DNA (4266bp) protein (1422aa)
DNA-directed RNA polymerase subunit beta'''' Tax=Segetibacter koreensis RepID=UPI0003677F0A
DNA-directed RNA polymerase subunit beta'
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 34 in total

View Taxonomy