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OR_07242016_12_scaffold_336

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_336_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

OR_07242016_12_scaffold_336_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(108..527)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQY2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62535.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07242016_12_scaffold_336_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

813..1094
DNA (282bp) protein (94aa)
10 kDa chaperonin Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG4_NIAKG
10 kDa chaperonin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1198..2835
DNA (1638bp) protein (546aa)
molecular chaperone GroEL Tax=Segetibacter koreensis RepID=UPI000366B2C7
60 kDa chaperonin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2915..3448)
DNA (534bp) protein (178aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_6
unknown

Not on your lists

comp(3448..3624)
DNA (177bp) protein (59aa)

This feature has no annotations

OR_07242016_12_scaffold_336_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3621..4331)
DNA (711bp) protein (237aa)
membrane protein Tax=Fluoribacter dumoffii RepID=UPI00026C7A6B
YhhN family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4456..4791
DNA (336bp) protein (112aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E30BF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4825..5295
DNA (471bp) protein (157aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037B5303
FKBP-type peptidylprolyl isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5437..8529
DNA (3093bp) protein (1031aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037C7C56
protein translocase subunit secD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_11
unknown

Not on your lists

8663..9049
DNA (387bp) protein (129aa)

This feature has no annotations

OR_07242016_12_scaffold_336_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9095..10405
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003811B1A
Putative RND-type efflux pump outer membrane protein {ECO:0000313|EMBL:GAO41644.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane efflux protein
OR_07242016_12_scaffold_336_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10431..11528
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003600864
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHQ29144.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
efflux transporter, rnd family, mfp subunit
OR_07242016_12_scaffold_336_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11588..14719
DNA (3132bp) protein (1044aa)
cation transporter Tax=Segetibacter koreensis RepID=UPI00036CAC8F
Putative RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO41646.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
CzcA family heavy metal efflux pump
OR_07242016_12_scaffold_336_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14823..16130
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000373F056
carbohydrate-selective porin OprB
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:AEV97374.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_336_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16182..16529)
DNA (348bp) protein (116aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000371313B
iron-sulfur binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16687..17181
DNA (495bp) protein (165aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035F4720
Uncharacterized protein {ECO:0000313|EMBL:KIC90197.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
OR_07242016_12_scaffold_336_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17223..18785
DNA (1563bp) protein (521aa)
methylmalonyl-CoA mutase Tax=Segetibacter koreensis RepID=UPI00037E6150
methylmalonyl-CoA mutase large subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18845..19276)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000379907F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19480..20997
DNA (1518bp) protein (506aa)
Beta-lactamase {ECO:0000313|EMBL:CCH54613.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CCH54613.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
beta-lactamase (EC:3.5.2.6)
beta-lactamase Tax=Spirosoma panaciterrae RepID=UPI0003768C52
OR_07242016_12_scaffold_336_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21026..22315
DNA (1290bp) protein (430aa)
Amidohydrolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE5_NIAKG
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22435..24012
DNA (1578bp) protein (526aa)
peptidase S9 Tax=Flavobacterium rivuli RepID=UPI00037EDE2C
peptidase S9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23993..24325
DNA (333bp) protein (111aa)
Peptidase S9 prolyl oligopeptidase Tax=Niabella soli DSM 19437 RepID=H1NT41_9SPHI
peptidase S9
Peptidase S9 {ECO:0000313|EMBL:AHF16742.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_336_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24461..25111)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE2_NIAKG
Alanine racemase {ECO:0000313|EMBL:KIC90202.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
OR_07242016_12_scaffold_336_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25186..26343)
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NUS9_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26418..27572)
DNA (1155bp) protein (385aa)
Butyryl-CoA dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE1_NIAKG
butyryl-CoA dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_336_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(27731..28762)
DNA (1032bp) protein (344aa)
acetamidase Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD5C3
acetamidase/formamidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
OR_07242016_12_scaffold_336_28
unknown

Not on your lists

comp(28855..29250)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 28 items

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