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OR_07242016_12_scaffold_340

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_340_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..402)
DNA (402bp) protein (134aa)
Inosine-5'-monophosphate dehydrogenase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y9_NIAKG
inosine-5'-monophosphate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1007..2104
DNA (1098bp) protein (366aa)
Major facilitator superfamily MFS_1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EN78_RUNSL
major facilitator superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2370..3467)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000381D154
DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:AHF16602.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_340_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3791..5659)
DNA (1869bp) protein (623aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000378476E
OmpA/MotB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_5
unknown

Not on your lists

comp(6153..6842)
DNA (690bp) protein (230aa)

This feature has no annotations

OR_07242016_12_scaffold_340_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6987..7592)
DNA (606bp) protein (202aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
7-carboxy-7-deazaguanine synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ8_NIAKG
radical SAM protein
OR_07242016_12_scaffold_340_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7708..8586)
DNA (879bp) protein (293aa)
Bifunctional protein FolD Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ9_NIAKG
bifunctional protein folD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8943..12167
DNA (3225bp) protein (1075aa)
TonB-dependent receptor plug Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTI3_HALH1
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12216..13646
DNA (1431bp) protein (477aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTI4_HALH1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13597..14124
DNA (528bp) protein (176aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036834C2
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14222..14911)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037DE05A
DNA repair protein RadC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14985..15941
DNA (957bp) protein (319aa)
ribose-phosphate pyrophosphokinase Tax=Segetibacter koreensis RepID=UPI00036F7206
ribose-phosphate pyrophosphokinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_13

Not on your lists


16165..16755
DNA (591bp) protein (197aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003608DB5
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
50S ribosomal protein L25P
OR_07242016_12_scaffold_340_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16826..17512)
DNA (687bp) protein (229aa)
Signal transduction histidine kinase Tax=Joostella marina DSM 19592 RepID=I3C779_9FLAO
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18262..18837
DNA (576bp) protein (192aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037BFCB3
peptidyl-tRNA hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18951..19562
DNA (612bp) protein (204aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003732C2E
fumarylacetoacetate (FAA) hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19601..21760
DNA (2160bp) protein (720aa)
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL5_NIAKG
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_340_trna_1
unknown

Not on your lists

21829..21902
DNA (74bp)
transferRNA Met
OR_07242016_12_scaffold_340_18
unknown

Not on your lists

22542..22748
DNA (207bp) protein (69aa)

This feature has no annotations

OR_07242016_12_scaffold_340_19
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22751..23212
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HYT7_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM39124.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
OR_07242016_12_scaffold_340_20
unknown

Not on your lists

comp(23707..23838)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 21 items

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