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OR_07242016_12_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_397_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

190..972
DNA (783bp) protein (261aa)
LytTR family two component transcriptional regulator Tax=Pedobacter agri RepID=UPI00029A9FF5
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_397_2
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(987..3278)
DNA (2292bp) protein (764aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
Tetratricopeptide repeat domain protein bin=GWD2_Bacteroidetes_33_33 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
tetratricopeptide repeat protein,histidine kinase
OR_07242016_12_scaffold_397_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3509..3853)
DNA (345bp) protein (115aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate 1-decarboxylase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ5_NIAKG
L-aspartate 1-decarboxylase
OR_07242016_12_scaffold_397_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3951..4451)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000365E9F5
protein of unknown function DUF985
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_397_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4571..5788
DNA (1218bp) protein (406aa)
Uncharacterized conserved protein UCP016719 Tax=Niabella soli DSM 19437 RepID=H1NMN3_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14652.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OR_07242016_12_scaffold_397_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5785..8628)
DNA (2844bp) protein (948aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEV99807.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEV99807.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-lactate dehydrogenase (Cytochrome) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM34_NIAKG
D-lactate dehydrogenase
OR_07242016_12_scaffold_397_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8769..9611)
DNA (843bp) protein (281aa)
transporter Tax=Segetibacter koreensis RepID=UPI0003640871
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Transporter {ECO:0000313|EMBL:GAL86651.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
OR_07242016_12_scaffold_397_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9580..11844)
DNA (2265bp) protein (755aa)
transporter Tax=Segetibacter koreensis RepID=UPI0003640871
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:AEW00311.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
OR_07242016_12_scaffold_397_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11857..12978)
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037D9DC3
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEW00312.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_397_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13001..14323)
DNA (1323bp) protein (441aa)
Outer membrane efflux protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAX0_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW00313.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_397_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14350..14922)
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6V8_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEV97961.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_397_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15013..17883)
DNA (2871bp) protein (957aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEW03019.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEW03019.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-lactate dehydrogenase (Cytochrome) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLE6_NIAKG
D-lactate dehydrogenase
OR_07242016_12_scaffold_397_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18208..18639)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LM85_TREBD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_397_14
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18860..19477
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S7S5_SHEAM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM00432.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
OR_07242016_12_scaffold_397_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19731..20123)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Flavobacterium saliperosum S13 RepID=V6SMR8_9FLAO
Truncated hemoglobin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_397_16
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20107..20568)
DNA (462bp) protein (154aa)
hemerythrin hhE cation binding domain-containing protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Hemerythrin HHE cation binding domain protein
Tax=GWB2_Ignavibacteria_35_6b_curated
OR_07242016_12_scaffold_397_17
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20584..21351)
DNA (768bp) protein (256aa)
Nitrous oxide reductase maturation transmembrane protein NosY Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNH0_9SPHI
Nitrous oxide reductase maturation transmembrane protein NosY {ECO:0000313|EMBL:EOR93392.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
nitrous-oxide metabolic protein NosY
OR_07242016_12_scaffold_397_18
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21348..22058)
DNA (711bp) protein (237aa)
Copper-transport ATP-binding protein NosF Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNV1_9SPHI
ABC transporter
Copper-transport ATP-binding protein NosF {ECO:0000313|EMBL:EOR93391.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
OR_07242016_12_scaffold_397_19
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22083..23312)
DNA (1230bp) protein (410aa)
Nitrous oxide reductase maturation protein NosD Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPB7_9SPHI
Nitrous oxide reductase maturation protein NosD {ECO:0000313|EMBL:EOR93390.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
copper-binding protein
OR_07242016_12_scaffold_397_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23309..24355)
DNA (1047bp) protein (349aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWQ1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93389.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
OR_07242016_12_scaffold_397_21
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24406..26382)
DNA (1977bp) protein (659aa)
Nitrous-oxide reductase {ECO:0000313|EMBL:EOR93388.1}; EC=1.7.2.4 {ECO:0000313|EMBL:EOR93388.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Nitrous-oxide reductase Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNT4_9SPHI
nitrous-oxide reductase
OR_07242016_12_scaffold_397_22
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26418..26897)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003651E0C
cytochrome c class I
Uncharacterized protein {ECO:0000313|EMBL:EOR93387.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
OR_07242016_12_scaffold_397_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27131..27724
DNA (594bp) protein (198aa)
Transcriptional regulator, Crp/Fnr family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS5_NIAKG
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEW01525.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_397_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27788..28993
DNA (1206bp) protein (402aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPC3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93395.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
OR_07242016_12_scaffold_397_25
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29057..29782
DNA (726bp) protein (242aa)
Nitric oxide-dependent regulator DnrN or NorA Tax=Fulvivirga imtechensis AK7 RepID=L8JT33_9BACT
Nitric oxide-dependent regulator DnrN or NorA {ECO:0000313|EMBL:ELR72005.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
iron-sulfur cluster repair di-iron protein
OR_07242016_12_scaffold_397_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30042..30668)
DNA (627bp) protein (209aa)
Methyltransferase-16 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKP8_NIAKG
methyltransferase-16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_397_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30882..32264)
DNA (1383bp) protein (461aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02330.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_397_28
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32266..32808)
DNA (543bp) protein (181aa)
5 nucleotidase deoxy cytosolic type C Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4N4_DYAFD
5'-nucleotidase {ECO:0000313|EMBL:KGO91280.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
5' nucleotidase
OR_07242016_12_scaffold_397_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32880..33623
DNA (744bp) protein (248aa)
Transcriptional regulator, DeoR family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL76_CHIPD
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACU58420.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_07242016_12_scaffold_397_30
unknown

Not on your lists

comp(33620..33757)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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