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OR_07242016_12_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_556_1
unknown

Not on your lists

274..978
DNA (705bp) protein (235aa)

This feature has no annotations

OR_07242016_12_scaffold_556_2
unknown

Not on your lists

1204..1662
DNA (459bp) protein (153aa)

This feature has no annotations

OR_07242016_12_scaffold_556_3
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(1747..2103)
DNA (357bp) protein (119aa)
membrane protein Tax=Pedobacter agri RepID=UPI00029A9F31
membrane protein
Tax=RBG_13_Spirochaetes_51_14_curated
OR_07242016_12_scaffold_556_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2433..3011)
DNA (579bp) protein (193aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035E6345
multiple antibiotic resistance (MarC)-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3129..3731)
DNA (603bp) protein (201aa)
Phosphoglycerate mutase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMN5_NIAKG
phosphoglycerate mutase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3864..4646)
DNA (783bp) protein (261aa)
ATP binding protein Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RGK5_CELLC
PP-loop superfamily ATP-utilizing enzyme {ECO:0000313|EMBL:AHM59050.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
ATP-binding protein
OR_07242016_12_scaffold_556_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4674..4895)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03061.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_556_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4899..5516)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECZ8_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48470.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
OR_07242016_12_scaffold_556_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5538..7475)
DNA (1938bp) protein (646aa)
TonB-dependent receptor plug Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L406_HALH1
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEE49723.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
OR_07242016_12_scaffold_556_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8037..9389
DNA (1353bp) protein (451aa)
Serine/threonine exchange transporter, LAT family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP4_NIAKG
serine/threonine exchange transporter, LAT family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9397..10491
DNA (1095bp) protein (365aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:AEE50403.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AEE50403.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Cystathionine beta-lyase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYJ7_HALH1
cystathionine beta-lyase
OR_07242016_12_scaffold_556_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10546..12039
DNA (1494bp) protein (498aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037B77C5
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12089..13456
DNA (1368bp) protein (456aa)
Efflux transporter, RND family, MFP subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP7_NIAKG
RND family efflux transporter MFP subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13553..14203
DNA (651bp) protein (217aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003628ED2
glycerol-3-phosphate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_15
unknown

Not on your lists

comp(14120..14536)
DNA (417bp) protein (139aa)

This feature has no annotations

OR_07242016_12_scaffold_556_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14713..15744)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D21A6
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEW03071.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_556_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15852..16967
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003755CED
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16993..17793
DNA (801bp) protein (267aa)
Uroporphyrinogen III synthase HEM4 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMQ3_NIAKG
uroporphyrinogen III synthase HEM4
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17900..19948
DNA (2049bp) protein (683aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037DB861
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03075.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_07242016_12_scaffold_556_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20159..21442
DNA (1284bp) protein (428aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000371A52E
sulfatase-modifying factor protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21555..22319
DNA (765bp) protein (255aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036727A4
gliding motility-associated protein GldL
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22375..23943
DNA (1569bp) protein (523aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003787BEC
gliding motility-associated protein GldM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23951..24970
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036932F3
gliding motility associated protein GldN
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25165..26973)
DNA (1809bp) protein (603aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000369CDCA
Excinuclease ABC subunit C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26986..27594)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003752515
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27768..29228)
DNA (1461bp) protein (487aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000362427F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29245..29742)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036A753B
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29854..31527
DNA (1674bp) protein (558aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFH9_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31538..33106
DNA (1569bp) protein (523aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJR8_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_07242016_12_scaffold_556_30
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33680..36169
DNA (2490bp) protein (830aa)
TonB-dependent receptor plug Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFH3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA87948.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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