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OR_07242016_12_scaffold_83

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Displaying items 1-30 of 107 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_83_1
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2..169)
DNA (168bp) protein (56aa)
Microcompartments protein Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1Z6_ACIFD
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ACU53093.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
OR_07242016_12_scaffold_83_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..475)
DNA (270bp) protein (90aa)
Carboxysome protein B bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carboxysome protein B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07242016_12_scaffold_83_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(477..728)
DNA (252bp) protein (84aa)
carboxysome protein A
Carboxysome protein A bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07242016_12_scaffold_83_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(739..2340)
DNA (1602bp) protein (534aa)
carboxysome shell protein CsoS3, carbonic anhydrase epsilon (EC:4.2.1.1)
Carboxysome shell protein CsoS3, carbonic anhydrase epsilon Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFK7_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_07242016_12_scaffold_83_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2366..4216)
DNA (1851bp) protein (617aa)
Carboxysome structural peptide CsoS2 Tax=Thiobacillus denitrificans RepID=Q9APD3_THIDE
carboxysome structural protein CsoS2
Carboxysome structural peptide CsoS2 {ECO:0000313|EMBL:AAG60037.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans.;"
OR_07242016_12_scaffold_83_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4384..5322
DNA (939bp) protein (313aa)
LysR family transcriptional regulator Tax=Thiobacillus thioparus RepID=UPI0003739297
cbbR3; transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
OR_07242016_12_scaffold_83_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5798..6136)
DNA (339bp) protein (113aa)
Transposase IS3/IS911 family protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWV0_HALNC
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACX97070.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_trna_4
unknown

Not on your lists

comp(6948..7020)
DNA (73bp)
transferRNA His
OR_07242016_12_scaffold_83_trna_3
unknown

Not on your lists

comp(7043..7116)
DNA (74bp)
transferRNA Arg
OR_07242016_12_scaffold_83_trna_2
unknown

Not on your lists

comp(7138..7211)
DNA (74bp)
transferRNA Pro
OR_07242016_12_scaffold_83_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..8728)
DNA (891bp) protein (297aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphate ABC transporter, ATPase subunit Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P4_HALNC
phosphate ABC transporter ATPase
OR_07242016_12_scaffold_83_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..9606)
DNA (840bp) protein (280aa)
Phosphate ABC transporter, inner membrane subunit PstA Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P5_HALNC
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:ACX96618.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9621..10601)
DNA (981bp) protein (327aa)
Phosphate ABC transporter, inner membrane subunit PstC Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P6_HALNC
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:ACX96619.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10747..11784)
DNA (1038bp) protein (346aa)
Phosphate-binding protein PstS Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P7_HALNC
phosphate ABC transporter substrate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12229..13149
DNA (921bp) protein (307aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P8_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96621.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13160..13705
DNA (546bp) protein (182aa)
FMN-binding domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P9_HALNC
FMN-binding domain-containing protein
FMN-binding domain protein {ECO:0000313|EMBL:ACX96622.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13702..14556
DNA (855bp) protein (285aa)
ApbE family lipoprotein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q0_HALNC
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ACX96623.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14546..14998
DNA (453bp) protein (151aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96624.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14936..17272)
DNA (2337bp) protein (779aa)
MscS Mechanosensitive ion channel Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q2_HALNC
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACX96625.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17348..19249)
DNA (1902bp) protein (634aa)
UvrABC system protein C Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q3_HALNC
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19246..19884)
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q4_HALNC
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACX96627.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19934..20419)
DNA (486bp) protein (162aa)
Adenylate cyclase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q5_HALNC
adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:ACX96628.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20470..21447)
DNA (978bp) protein (326aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q6_HALNC
OR_07242016_12_scaffold_83_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21444..22466)
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphate acyltransferase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q7_HALNC
fatty acid/phospholipid synthesis protein PlsX
OR_07242016_12_scaffold_83_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22631..22819)
DNA (189bp) protein (63aa)
50S ribosomal protein L32 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q8_HALNC
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22915..23580)
DNA (666bp) protein (222aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96632.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23686..24333
DNA (648bp) protein (216aa)
Maf-like protein Hneap_1810 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1R0_HALNC
maf protein
Maf-like protein Hneap_1810 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24568..25788)
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1R1_HALNC
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACX96634.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26541..27116)
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1R2_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96635.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_83_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27317..28045
DNA (729bp) protein (243aa)
Two component transcriptional regulator, winged helix family Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1R3_HALNC
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACX96636.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 107 in total

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