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OR_07242016_12_scaffold_202

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_12_scaffold_202_1
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(576..1028)
DNA (453bp) protein (151aa)
membrane protein Tax=Verrucomicrobium sp. 3C RepID=UPI000382A7F9
putative permease of the major facilitator superfamily
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
OR_07242016_12_scaffold_202_2
unknown

Not on your lists

1367..1948
DNA (582bp) protein (194aa)

This feature has no annotations

OR_07242016_12_scaffold_202_3
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2040..2993)
DNA (954bp) protein (318aa)
Probable phage integrase Tax=Leptospirillum ferrodiazotrophum RepID=C6I084_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA30413.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
OR_07242016_12_scaffold_202_4
unknown

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comp(2996..3481)
DNA (486bp) protein (162aa)

This feature has no annotations

OR_07242016_12_scaffold_202_5
unknown

Not on your lists

comp(3603..3869)
DNA (267bp) protein (89aa)

This feature has no annotations

OR_07242016_12_scaffold_202_6
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3999..4988
DNA (990bp) protein (330aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI0003757A93
TXfu1; Xfu1 transposase
Xfu1 transposase {ECO:0000313|EMBL:CDF61508.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. fuscans.;"
OR_07242016_12_scaffold_202_trna_1
unknown

Not on your lists

comp(5389..5475)
DNA (87bp)
transferRNA Ser
OR_07242016_12_scaffold_202_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5545..6747)
DNA (1203bp) protein (401aa)
Ammonium transporter Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXQ0_HALNC
ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:ACX95223.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6830..7036)
DNA (207bp) protein (69aa)
Carbon storage regulator homolog Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP9_HALNC
carbon storage regulator CsrA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7127..8359)
DNA (1233bp) protein (411aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Aspartokinase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP8_HALNC
OR_07242016_12_scaffold_202_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8549..11176)
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP7_HALNC
OR_07242016_12_scaffold_202_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11314..11790)
DNA (477bp) protein (159aa)
Regulatory protein RecX Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP5_HALNC
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11807..12859)
DNA (1053bp) protein (351aa)
Protein RecA Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP4_HALNC
recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12909..14084)
DNA (1176bp) protein (392aa)
Aminotransferase class I and II Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP3_HALNC
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACX95216.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14205..15005)
DNA (801bp) protein (267aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP2_HALNC
TrmH family RNA methyltransferase
OR_07242016_12_scaffold_202_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15008..17446)
DNA (2439bp) protein (813aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ribonuclease R (EC:3.1.13.1)
Ribonuclease R Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP1_HALNC
OR_07242016_12_scaffold_202_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17628..19667
DNA (2040bp) protein (680aa)
UvrABC system protein B Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP0_HALNC
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
excinuclease ABC subunit B
OR_07242016_12_scaffold_202_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19760..20425)
DNA (666bp) protein (222aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXN9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95212.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20592..20954)
DNA (363bp) protein (121aa)
50S ribosomal protein L17 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXN8_HALNC
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20984..21979)
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
DNA-directed RNA polymerase subunit alpha Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXN7_HALNC
DNA-directed RNA polymerase subunit alpha
OR_07242016_12_scaffold_202_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21997..22620)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXN6_HALNC
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22634..23023)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ4_HALNC
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23068..23424)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ3_HALNC
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23501..24835)
DNA (1335bp) protein (445aa)
Protein translocase subunit SecY Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ2_HALNC
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24839..25267)
DNA (429bp) protein (143aa)
50S ribosomal protein L15 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ1_HALNC
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25267..25458)
DNA (192bp) protein (64aa)
50S ribosomal protein L30 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ0_HALNC
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25455..25970)
DNA (516bp) protein (172aa)
30S ribosomal protein S5 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI9_HALNC
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25982..26338)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI8_HALNC
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26348..26875)
DNA (528bp) protein (176aa)
50S ribosomal protein L6 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI7_HALNC
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_12_scaffold_202_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26889..27281)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI6_HALNC
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 46 in total

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