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OR_07242016_13_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_13_scaffold_16_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..178
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Escherichia coli RepID=N2BZL0_ECOLX
P4-family integrase
Integrase {ECO:0000313|EMBL:EFR15918.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
OR_07242016_13_scaffold_16_2
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298..579
DNA (282bp) protein (94aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DID3_9GAMM
programmed cell death antitoxin MazE
Programmed cell death antitoxin MazE {ECO:0000313|EMBL:AHE98271.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
OR_07242016_13_scaffold_16_3
Vibrio sp. ER1A, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583..930
DNA (348bp) protein (116aa)
MazF family transcriptional regulator Tax=Alcanivorax sp. PN-3 RepID=U7HS52_9GAMM
MazF family transcriptional regulator {ECO:0000313|EMBL:KFA99506.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. ER1A.;"
transcriptional modulator of MazE/toxin, MazF
OR_07242016_13_scaffold_16_4
unknown

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1491..2081
DNA (591bp) protein (197aa)

This feature has no annotations

OR_07242016_13_scaffold_16_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2078..3133
DNA (1056bp) protein (352aa)
hypothetical protein Tax=Novispirillum itersonii RepID=UPI00036DDF25
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABM43726.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
OR_07242016_13_scaffold_16_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3486..4391
DNA (906bp) protein (302aa)
DNA-binding protein Tax=Aquaspirillum serpens RepID=UPI0003B78CB8
helix-turn-helix, type 11 domain-containing protein
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:ABM38048.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
OR_07242016_13_scaffold_16_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4393..5595
DNA (1203bp) protein (401aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0X3_HALNC
hypothetical protein
Tax=CG_Rhodof_02
OR_07242016_13_scaffold_16_8
unknown

Not on your lists

5671..7413
DNA (1743bp) protein (581aa)

This feature has no annotations

OR_07242016_13_scaffold_16_9
unknown

Not on your lists

7557..7730
DNA (174bp) protein (58aa)

This feature has no annotations

OR_07242016_13_scaffold_16_10
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8147
DNA (288bp) protein (96aa)
ISRSO9-transposase protein Tax=Nitrosomonas sp. AL212 RepID=F0TDB2_9PROT
ISRSO9-transposase protein
ISRSO9-transposase protein {ECO:0000313|EMBL:ADZ28102.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
OR_07242016_13_scaffold_16_trna_5
unknown

Not on your lists

comp(8756..8842)
DNA (87bp)
transferRNA Ser
OR_07242016_13_scaffold_16_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9046..9552
DNA (507bp) protein (169aa)
Peptidoglycan-associated lipoprotein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY93_HALNC
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ACX95416.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9645..13277)
DNA (3633bp) protein (1211aa)
exodeoxyribonuclease V subunit gamma (EC:3.1.11.5)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Exodeoxyribonuclease V, gamma subunit Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY94_HALNC
OR_07242016_13_scaffold_16_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13460..14494)
DNA (1035bp) protein (345aa)
Diguanylate cyclase with GAF sensor Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY95_HALNC
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ACX95418.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14623..15186)
DNA (564bp) protein (188aa)
Elongation factor P Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY96_HALNC
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15249..16460)
DNA (1212bp) protein (404aa)
Uncharacterized conserved protein UCP015557 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY97_HALNC
hypothetical protein
Uncharacterized conserved protein UCP015557 {ECO:0000313|EMBL:ACX95420.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16427..17938)
DNA (1512bp) protein (504aa)
Redoxin domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY98_HALNC
redoxin
Redoxin domain protein {ECO:0000313|EMBL:ACX95421.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17968..19902
DNA (1935bp) protein (645aa)
ABC transporter related protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY99_HALNC
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACX95422.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19924..20232
DNA (309bp) protein (103aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYA0_HALNC
hypothetical protein
UPF0235 protein Hneap_0569 {ECO:0000256|HAMAP-Rule:MF_00634}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20305..20628)
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYD8_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95461.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_16_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20774..22234
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Inosine-5'-monophosphate dehydrogenase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYD9_HALNC
OR_07242016_13_scaffold_16_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22318..23904
DNA (1587bp) protein (529aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
GMP synthase [glutamine-hydrolyzing] Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYE0_HALNC
guaA; GMP synthase
OR_07242016_13_scaffold_16_22
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24261..24698
DNA (438bp) protein (146aa)
integrase Tax=Bordetella sp. FB-8 RepID=UPI00035DB3D3
Putative phage integrase {ECO:0000313|EMBL:CCA82254.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
phage integrase family protein
OR_07242016_13_scaffold_16_23
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24598..25305)
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Burkholderia sp. H160 RepID=B5WH78_9BURK
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP88347.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
OR_07242016_13_scaffold_16_24
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25286..27166)
DNA (1881bp) protein (627aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWK7_AROAE
Uncharacterized protein {ECO:0000313|EMBL:CAI10557.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
hypothetical protein
OR_07242016_13_scaffold_16_25
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27260..27676)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PN72_9ZZZZ
uncharacterized conserved protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAO82756.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
OR_07242016_13_scaffold_16_26
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27688..27870)
DNA (183bp) protein (61aa)
YcfA-like protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBF9_THIV6
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_07242016_13_scaffold_16_27
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28304..29161
DNA (858bp) protein (286aa)
Carboxylesterase {ECO:0000313|EMBL:GAO34138.1}; EC=3.1.1.1 {ECO:0000313|EMBL:GAO34138.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
Alpha/beta hydrolase fold protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM76_SIDLE
alpha/beta hydrolase fold protein
OR_07242016_13_scaffold_16_28
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29136..29390
DNA (255bp) protein (85aa)
Acyl carrier protein Tax=Polaromonas sp. CF318 RepID=J2LBZ8_9BURK
Acyl carrier protein {ECO:0000313|EMBL:EJL82698.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
phosphopantetheine-binding protein
OR_07242016_13_scaffold_16_29
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29383..30612
DNA (1230bp) protein (410aa)
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYP3_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII {ECO:0000313|EMBL:EGF32262.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
Beta-ketoacyl synthase
Displaying items 1-30 of 163 in total

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