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OR_07242016_13_scaffold_356

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_13_scaffold_356_1
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3..707
DNA (705bp) protein (235aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U290_SULKY
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_13_scaffold_356_2
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

822..1157
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7T1T6_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV97854.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_13_scaffold_356_3
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1260..2645
DNA (1386bp) protein (462aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U292_SULKY
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_13_scaffold_356_4
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

2642..3106
DNA (465bp) protein (155aa)
OsmC family protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U293_SULKY
osmc family protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_13_scaffold_356_5
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3303..4376
DNA (1074bp) protein (358aa)
Diguanylate cyclase, possibly oxygen sensing (GGDEF & globin domain) Tax=Sulfurimonas gotlandica GD1 RepID=B6BGM2_9HELI
Diguanylate cyclase, possibly oxygen sensing (GGDEF & globin domain) {ECO:0000313|EMBL:EHP29652.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
diguanylate cyclase
OR_07242016_13_scaffold_356_6
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(4381..4737)
DNA (357bp) protein (119aa)
Histidine triad (HIT) protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U295_SULKY
Uncharacterized protein {ECO:0000313|EMBL:KFN38520.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
histidine triad (hit) protein
OR_07242016_13_scaffold_356_7
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


4827..5840
DNA (1014bp) protein (338aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
Phenylalanine--tRNA ligase alpha subunit Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U296_SULKY
OR_07242016_13_scaffold_356_8
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5837..8170
DNA (2334bp) protein (778aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00089711};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U297_SULKY
OR_07242016_13_scaffold_356_9
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8167..9444
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U298_SULKY
OR_07242016_13_scaffold_356_10
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9441..10274
DNA (834bp) protein (278aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U299_SULKY
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_07242016_13_scaffold_356_11
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


10348..12003
DNA (1656bp) protein (552aa)
30S ribosomal protein S1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SNB7_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV97846.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_13_scaffold_356_12
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12010..12492
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U2A1_SULKY
Uncharacterized protein {ECO:0000313|EMBL:KFN38514.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
hypothetical protein
OR_07242016_13_scaffold_356_13
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12497..14086
DNA (1590bp) protein (530aa)
Uncharacterized protein Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7T1T0_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV97844.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
OR_07242016_13_scaffold_356_14
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14163..14669)
DNA (507bp) protein (169aa)
Putative uncharacterized protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QGN7_DESAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN13512.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
OR_07242016_13_scaffold_356_15
Kingella oralis, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14727..15065)
DNA (339bp) protein (113aa)
NAD dependent epimerase/dehydratase family protein Tax=Kingella oralis ATCC 51147 RepID=C4GMV1_9NEIS
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEP66636.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella oralis ATCC 51147.;"
hypothetical protein
Displaying 15 items

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