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OR_08082017_0_5m_0_2um_scaffold_10

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Displaying items 1-30 of 497 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_0_5m_0_2um_scaffold_10_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

OR_08082017_0_5m_0_2um_scaffold_10_2
unknown

Not on your lists

comp(67..201)
DNA (135bp) protein (45aa)

This feature has no annotations

OR_08082017_0_5m_0_2um_scaffold_10_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565..1719)
DNA (1155bp) protein (385aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V456_SPHWW
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ67072.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1793..2941)
DNA (1149bp) protein (383aa)
Aldo/keto reductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V463_SPHWW
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABQ67079.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_5
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2978..3328)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V464_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67080.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..5629)
DNA (2253bp) protein (751aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBS5_NOVAD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABD24698.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
OR_08082017_0_5m_0_2um_scaffold_10_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..6426
DNA (615bp) protein (205aa)
Regulatory protein TetR n=1 Tax=Pseudomonas fluorescens BRIP34879 RepID=L7HIW9_PSEFL
Regulatory protein TetR {ECO:0000313|EMBL:ELQ17979.1}; TaxID=1205750 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BRIP34879.;"
regulatory protein TetR
OR_08082017_0_5m_0_2um_scaffold_10_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..8104)
DNA (1509bp) protein (503aa)
aldehyde dehydrogenase n=1 Tax=Sphingomonas wittichii RepID=UPI0002D29427
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABQ70098.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8131..9723)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002E08443
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ABQ70099.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9791..10198
DNA (408bp) protein (136aa)
Ketosteroid isomerase-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCT4_SPHWW
ketosteroid isomerase-like protein
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:ABQ70100.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10251..10700
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003617DEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70101.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10700..11659
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002E16372
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ70102.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11734..14166
DNA (2433bp) protein (811aa)
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCT7_SPHWW
TonB-dependent receptor {ECO:0000313|EMBL:ABQ70103.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
TonB-dependent receptor
OR_08082017_0_5m_0_2um_scaffold_10_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14191..15780
DNA (1590bp) protein (530aa)
Amidohydrolase 3 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCT8_SPHWW
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABQ70104.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15770..16771
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002D685C1
cobalamin synthesis protein, P47K
Cobalamin synthesis protein, P47K {ECO:0000313|EMBL:ABQ70105.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..18016)
DNA (1239bp) protein (413aa)
FAD dependent oxidoreductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCU0_SPHWW
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABQ70106.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..18526)
DNA (423bp) protein (141aa)
Endoribonuclease L-PSP n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCU1_SPHWW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABQ70107.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_18
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18564..19715)
DNA (1152bp) protein (384aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ABQ70108.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ABQ70108.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Ornithine cyclodeaminase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCU2_SPHWW
OR_08082017_0_5m_0_2um_scaffold_10_19
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19809..20921)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00031318B8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70109.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_20
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20968..22455)
DNA (1488bp) protein (496aa)
FAD linked oxidase domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCU4_SPHWW
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABQ70110.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22929..24341)
DNA (1413bp) protein (471aa)
aldehyde dehydrogenase n=1 Tax=Sphingomonas wittichii RepID=UPI0003038B62
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABQ69586.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_22
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24396..25721)
DNA (1326bp) protein (442aa)
Putative amino acid transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHU9_9SPHN
Putative amino acid transporter {ECO:0000313|EMBL:GAD47542.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
amino acid permease-associated protein
OR_08082017_0_5m_0_2um_scaffold_10_23
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26196..27179
DNA (984bp) protein (328aa)
Putative AraC family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3H9_9SPHN
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAD47546.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
helix-turn-helix domain-containing protein
OR_08082017_0_5m_0_2um_scaffold_10_24
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27193..28491)
DNA (1299bp) protein (433aa)
FAD dependent oxidoreductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6N9_SPHWW
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABQ67955.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_25
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28538..28960)
DNA (423bp) protein (141aa)
endoribonuclease n=1 Tax=Burkholderia glumae RepID=UPI000312C529
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACR30597.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
OR_08082017_0_5m_0_2um_scaffold_10_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29026..30165)
DNA (1140bp) protein (380aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6N7_SPHWW
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:ABQ67953.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
OR_08082017_0_5m_0_2um_scaffold_10_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30617..31726
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47549.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
histone deacetylase superfamily protein
OR_08082017_0_5m_0_2um_scaffold_10_28
unknown

Not on your lists

comp(31681..31833)
DNA (153bp) protein (51aa)

This feature has no annotations

OR_08082017_0_5m_0_2um_scaffold_10_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32144..33325
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase, type 2, C-terminal domain n=3 Tax=Sphingomonas wittichii RepID=A5V489_SPHWW
Pigment protein {ECO:0000313|EMBL:GAO53185.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acyl-CoA dehydrogenase type 2
OR_08082017_0_5m_0_2um_scaffold_10_30
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33349..33705
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V490_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:GAO53186.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying items 1-30 of 497 in total

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