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OR_08082017_2m_0_2um_scaffold_422

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_2m_0_2um_scaffold_422_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..318
-----------------
DNA (318bp)
protein (106aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZU6_HALNC
OR_08082017_2m_0_2um_scaffold_422_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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263..1168
-----------------
DNA (906bp)
protein (302aa)
pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094309};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Pantothenate synthetase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZU7_HALNC
OR_08082017_2m_0_2um_scaffold_422_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1235..2194
-----------------
DNA (960bp)
protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZU8_HALNC
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
OR_08082017_2m_0_2um_scaffold_422_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2172..3566
-----------------
DNA (1395bp)
protein (465aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZU9_HALNC
tRNA(Ile)-lysidine synthetase
OR_08082017_2m_0_2um_scaffold_422_5
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3594..4106
-----------------
DNA (513bp)
protein (171aa)
Putative uncharacterized protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6P9_ARCNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG94319.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
OR_08082017_2m_0_2um_scaffold_422_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4099..4848
-----------------
DNA (750bp)
protein (250aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV0_HALNC
hypothetical protein
OR_08082017_2m_0_2um_scaffold_422_7
unknown

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comp(4780..5040)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

OR_08082017_2m_0_2um_scaffold_422_8
unknown

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5056..5244
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

OR_08082017_2m_0_2um_scaffold_422_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5202..5798
-----------------
DNA (597bp)
protein (199aa)
ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV1_HALNC
OR_08082017_2m_0_2um_scaffold_422_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5795..7006
-----------------
DNA (1212bp)
protein (404aa)
Cytochrome b n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV2_HALNC
cytochrome b/b6 domain-containing protein
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_422_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7003..7767
-----------------
DNA (765bp)
protein (255aa)
Cytochrome c1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV3_HALNC
cytochrome C1
Cytochrome c1 {ECO:0000313|EMBL:ACX95976.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_422_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7892..9049
-----------------
DNA (1158bp)
protein (386aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV4_HALNC
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACX95977.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_422_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9049..9276
-----------------
DNA (228bp)
protein (76aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV4_HALNC
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACX95977.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_422_trna_4
unknown

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comp(9348..9420)
-----------------
DNA (73bp)
transferRNA Glu
OR_08082017_2m_0_2um_scaffold_422_trna_3
unknown

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comp(9483..9555)
-----------------
DNA (73bp)
transferRNA Glu
OR_08082017_2m_0_2um_scaffold_422_trna_2
unknown

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comp(9560..9633)
-----------------
DNA (74bp)
transferRNA Arg
OR_08082017_2m_0_2um_scaffold_422_trna_1
unknown

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comp(9638..9710)
-----------------
DNA (73bp)
transferRNA Asn
OR_08082017_2m_0_2um_scaffold_422_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9821..10336)
-----------------
DNA (516bp)
protein (172aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZV5_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95978.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_422_15
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10375..10845)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B41218
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47471.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
OR_08082017_2m_0_2um_scaffold_422_16
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10832..13045)
-----------------
DNA (2214bp)
protein (738aa)
ABC transporter n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3D1F4
ABC transporter ATP-binding protein
Putative ABC transporter, ATP-binding membrane component {ECO:0000313|EMBL:CAQ68735.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
OR_08082017_2m_0_2um_scaffold_422_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13292..15463
-----------------
DNA (2172bp)
protein (724aa)
Cyanophycin synthase (L-aspartate-adding) {ECO:0000313|EMBL:KDD64572.1}; EC=6.3.2.29 {ECO:0000313|EMBL:KDD64572.1};; EC=6.3.2.30 {ECO:0000313|EMBL:KDD64572.1};; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
Cyanophycin synthetase n=2 Tax=Bordetella bronchiseptica RepID=K0N0M3_BORBM
cphA; cyanophycin synthetase
OR_08082017_2m_0_2um_scaffold_422_18
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15521..16561
-----------------
DNA (1041bp)
protein (347aa)
Cyanophycin synthase (EC:6.3.2.30 6.3.2.29)
Cyanophycin synthetase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPZ0_AZOSU
Cyanophycin synthetase {ECO:0000313|EMBL:EXU80634.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
Displaying 22 items

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