name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
OR_08142018_10m_0_1um_scaffold_113_trna_6
unknown
|
Not on your lists |
comp(39..111)
|
transferRNA Trp
|
|
OR_08142018_10m_0_1um_scaffold_113_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(182..1372)
|
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu, partial n=2 Tax=Thiobacillus denitrificans RepID=UPI000376B2A7
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1419..3488)
|
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G id=12495326 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
elongation factor G
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3520..3990)
|
30S ribosomal protein S7 n=1 Tax=Thiobacillus thioparus RepID=UPI0003610F4E
30S ribosomal protein S7
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4009..4386)
|
30S ribosomal protein S12 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS12_THIDA
rpsL; 30S ribosomal protein S12
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4554..8753)
|
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F6840
|
|
OR_08142018_10m_0_1um_scaffold_113_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8775..11981)
|
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E57C9
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12064..12618)
|
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RPOB_THIDA
|
|
OR_08142018_10m_0_1um_scaffold_113_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12847..13224)
|
50S ribosomal protein L7/L12 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E9230
rplL; 50S ribosomal protein L7/L12
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13293..13703)
|
50S ribosomal protein L10 n=1 Tax=Thiobacillus thioparus RepID=UPI00037236CC
rplJ; 50S ribosomal protein L10
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13833..14528)
|
50S ribosomal protein L1 n=1 Tax=Thiobacillus thioparus RepID=UPI00037B74CA
50S ribosomal protein L1
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14530..14961)
|
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=12498637 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rplK; 50S ribosomal protein L11
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15063..15590)
|
transcription antitermination protein NusG n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D6399
transcription antitermination protein nusG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15593..15940)
|
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE id=12495336 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secE; preprotein translocase subunit SecE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_trna_5
unknown
|
Not on your lists |
comp(15973..16045)
|
transferRNA Trp
|
|
OR_08142018_10m_0_1um_scaffold_113_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16036..17214)
|
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu id=12495325 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tuf; elongation factor Tu (EC:3.6.5.3)
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_trna_4
unknown
|
Not on your lists |
comp(17380..17451)
|
transferRNA Thr
|
|
OR_08142018_10m_0_1um_scaffold_113_trna_3
unknown
|
Not on your lists |
comp(17509..17579)
|
transferRNA Gly
|
|
OR_08142018_10m_0_1um_scaffold_113_trna_2
unknown
|
Not on your lists |
comp(17611..17692)
|
transferRNA Tyr
|
|
OR_08142018_10m_0_1um_scaffold_113_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17763..18854)
|
Putative uncharacterized protein id=1308457 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18851..19453)
|
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Peptidyl-tRNA hydrolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PTH_THIDA
|
|
OR_08142018_10m_0_1um_scaffold_113_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19493..20095)
|
50S ribosomal protein L25 id=1308455 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L25
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20182..21132)
|
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=1308454 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_trna_1
unknown
|
Not on your lists |
comp(21208..21279)
|
transferRNA Gln
|
|
OR_08142018_10m_0_1um_scaffold_113_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21287..22177)
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788A70
|
|
OR_08142018_10m_0_1um_scaffold_113_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22174..22728)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360F0F9
outer membrane lipoprotein LolB
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22728..24509)
|
Putative uncharacterized protein id=1308451 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24592..25746)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D750D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25743..26456)
|
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00036DFF89
ABC transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
OR_08142018_10m_0_1um_scaffold_113_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26456..27583)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371F6CC
RND family efflux transporter MFP subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|