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OR_08142018_10m_0_1um_scaffold_326

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_326_1
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..85
DNA (84bp) protein (28aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002FAEF0F
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
OR_08142018_10m_0_1um_scaffold_326_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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251..562
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Thiomicrospira halophila RepID=UPI00036CC18C
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
rpsJ; 30S ribosomal protein S10
OR_08142018_10m_0_1um_scaffold_326_3
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


622..1260
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=6 Tax=Aeromonas veronii RepID=F4DGF6_AERVB
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1354302 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila 4AK4.;"
50S ribosomal protein L3
OR_08142018_10m_0_1um_scaffold_326_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1273..1893
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Thiomicrospira arctica RepID=UPI000382C65B
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_326_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1890..2183
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Thiomicrospira arctica RepID=UPI00036062E5
50S ribosomal protein L23
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_326_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2197..3030
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8Y1_9GAMM
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_7
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3041..3316
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D971_THICA
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_326_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3327..3662
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D972_THICA
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_326_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3673..4371
DNA (699bp) protein (233aa)
30S ribosomal protein S3 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8X8_9GAMM
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_10
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4387..4800
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Microbulbifer variabilis RepID=UPI000366B047
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_326_11
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4802..4990
DNA (189bp) protein (63aa)
50S ribosomal protein L29 n=2 Tax=Idiomarina loihiensis RepID=RL29_IDILO
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC 1A10513.;"
OR_08142018_10m_0_1um_scaffold_326_12
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4987..5247
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Oleispira antarctica RB-8 RepID=R4YQP7_OLEAN
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
30S ribosomal protein S17
OR_08142018_10m_0_1um_scaffold_326_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5365..5733
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8X4_9GAMM
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_14
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5747..6058
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Thiomicrospira halophila RepID=UPI000376B80F
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
rplX; 50S ribosomal protein L24
OR_08142018_10m_0_1um_scaffold_326_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6074..6613
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8X2_9GAMM
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6622..6927
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RS14_THICR
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000255|HAMAP-Rule:MF_00537}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_326_17
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6952..7347
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=RS8_SHEAM
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
OR_08142018_10m_0_1um_scaffold_326_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7359..7892
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL6_THICR
rplF; 50S ribosomal protein L6
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_326_19
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7903..8256
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thiothrix disciformis RepID=UPI00037870CB
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=715451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas sp. (strain SN2).;"
OR_08142018_10m_0_1um_scaffold_326_20
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8268..8786
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8W7_9GAMM
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_21
Succinatimonas sp. CAG:777, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8789..8971
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Succinatimonas sp. CAG:777 RepID=R5EYK6_9GAMM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1262974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas; environmental samples.;" source="Succinatimonas sp. CAG:777.;"
rpmD; 50S ribosomal protein L30
OR_08142018_10m_0_1um_scaffold_326_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8971..9408
DNA (438bp) protein (146aa)
50S ribosomal protein L15 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8W5_9GAMM
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_326_23
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9411..10721
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IW2_THICR
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_326_24
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10801..11157
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=3 Tax=Cycloclasticus RepID=K0C5D3_CYCSP
Ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
OR_08142018_10m_0_1um_scaffold_326_25
Marinobacter sp. C1S70, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11177..11572
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=9 Tax=Marinobacter RepID=RS11_MARAV
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1396859 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. C1S70.;"
OR_08142018_10m_0_1um_scaffold_326_26
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11588..12208
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Thiomicrospira halophila RepID=UPI000370AF27
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
30S ribosomal protein S4
OR_08142018_10m_0_1um_scaffold_326_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12244..13227
DNA (984bp) protein (328aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RPOA_THICR
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_326_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13244..13618
DNA (375bp) protein (125aa)
50S ribosomal protein L17 n=1 Tax=Dasania marina RepID=UPI000379F2F4
50S ribosomal protein L17
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_326_29
Simonsiella muelleri, Simonsiella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13680..14414
DNA (735bp) protein (245aa)
TatD family hydrolase n=1 Tax=Simonsiella muelleri ATCC 29453 RepID=U6Q2A3_9NEIS
TatD family hydrolase {ECO:0000313|EMBL:EJZ50255.1}; TaxID=641147 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Simonsiella.;" source="Simonsiella muelleri ATCC 29453.;"
TatD DNase family protein
OR_08142018_10m_0_1um_scaffold_326_30
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15132
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003826397
heme biosynthesis protein HemY
Heme biosynthesis protein HemY {ECO:0000313|EMBL:AHF04475.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Displaying items 1-30 of 35 in total

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