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OR_08142018_10m_0_1um_scaffold_371

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_371_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..213)
DNA (213bp) protein (71aa)
Membrane-associated zinc metalloprotease n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0Q6_HALNC
membrane-associated zinc metalloprotease
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_371_2
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(210..1019)
DNA (810bp) protein (270aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
Phosphatidate cytidylyltransferase n=1 Tax=Pseudomonas syringae pv. maculicola str. ES4326 RepID=F3HJE4_PSEYM
cdsA; phosphatidate cytidylyltransferase
OR_08142018_10m_0_1um_scaffold_371_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1012..1752)
DNA (741bp) protein (247aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G47_THICR
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_371_4
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1761..2318)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Cellvibrio sp. BR RepID=I3IA01_9GAMM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
frr; ribosome recycling factor
OR_08142018_10m_0_1um_scaffold_371_5
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2325..3041)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
pyrH; uridylate kinase (EC:2.7.4.-)
uridylate kinase n=1 Tax=Thiomicrospira arctica RepID=UPI0003748D1E
OR_08142018_10m_0_1um_scaffold_371_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3045..3932)
DNA (888bp) protein (296aa)
Elongation factor Ts n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=EFTS_THICR
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
tsf; elongation factor Ts
OR_08142018_10m_0_1um_scaffold_371_7
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4061..4801)
DNA (741bp) protein (247aa)
30S ribosomal protein S2 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DD02_THICA
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_371_8
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4999..5793
DNA (795bp) protein (265aa)
map; Methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036F6E74
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
OR_08142018_10m_0_1um_scaffold_371_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5790..8372
DNA (2583bp) protein (861aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Z4_9GAMM
protein-PII uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_371_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8421..9725)
DNA (1305bp) protein (435aa)
membrane protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B503F9
CBS-containing domain containing hemolysin {ECO:0000313|EMBL:ELS29367.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_371_11
unknown

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9927..10496
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Marinobacterium stanieri RepID=UPI0002558C06
OR_08142018_10m_0_1um_scaffold_371_12
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10633..12501)
DNA (1869bp) protein (623aa)
Chaperone protein HtpG n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBS7_9GAMM
heat shock protein 90
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_371_13
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12587..14992
DNA (2406bp) protein (802aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BDE0_9GAMM
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
OR_08142018_10m_0_1um_scaffold_371_14
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15146..16051)
DNA (906bp) protein (302aa)
Protease HtpX {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000255|HAMAP-Rule:MF_00188}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Protease HtpX n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=HTPX_THICR
heat shock protein HtpX
OR_08142018_10m_0_1um_scaffold_371_15
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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16183..16905
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GSH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KIM05109.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_371_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16971..17201)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBT5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01659.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Displaying 16 items

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