ggKbase home page

OR_08142018_2_5m_0_1um_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_7_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
Galactokinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSG5_HALH1
galactokinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(188..1300)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003783B41
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1302..2576)
DNA (1275bp) protein (425aa)
arylsulfatase n=1 Tax=Rudanella lutea RepID=UPI0003817935
sulfatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2938..3156)
DNA (219bp) protein (73aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3260..4141)
DNA (882bp) protein (294aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI17_CHIPD
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4120..5031)
DNA (912bp) protein (304aa)
dithiol-disulfide isomerase n=1 Tax=Pontibacter roseus RepID=UPI00037CDC9D
DSBA oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5140..5718)
DNA (579bp) protein (193aa)
cyclic nucleotide-binding protein n=1 Tax=Pontibacter roseus RepID=UPI0003626475
cyclic nucleotide-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_8
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6365..6877
DNA (513bp) protein (171aa)
Nuclease n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VV1_CYTH3
nuclease
Nuclease {ECO:0000313|EMBL:ABG58465.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
OR_08142018_2_5m_0_1um_scaffold_7_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6905..7654
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ79_FLUTR
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_10
unknown

Not on your lists

comp(7732..7965)
DNA (234bp) protein (78aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_7_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8180..8791)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8U9_PEDSD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10024..10398)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037ADBB8
CrcB protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10395..10820)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0W3_EMTOG
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AFK05566.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
OR_08142018_2_5m_0_1um_scaffold_7_14
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10836..13946)
DNA (3111bp) protein (1037aa)
Cation/multidrug efflux pump n=1 Tax=Joostella marina DSM 19592 RepID=I3C6S6_9FLAO
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIJ39319.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
acriflavin resistance protein
OR_08142018_2_5m_0_1um_scaffold_7_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(13930..14544)
DNA (615bp) protein (205aa)
Phosphoesterase PA-phosphatase related protein id=1823270 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
phosphoesterase PA-phosphatase-like protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
OR_08142018_2_5m_0_1um_scaffold_7_16
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14541..15464)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C6S5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ39318.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_7_17
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15475..16791)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C6S4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ39317.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_7_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16754..17188)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVR9_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42901.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
OR_08142018_2_5m_0_1um_scaffold_7_19
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17199..17627)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KFF14948.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_7_20
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17700..18965)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003481ECA
Histidine kinase {ECO:0000313|EMBL:KIA94449.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
integral membrane sensor signal transduction histidine kinase
OR_08142018_2_5m_0_1um_scaffold_7_21
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18958..19635)
DNA (678bp) protein (226aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DA88D
two component transcriptional regulator, winged helix family
Tax=BJP_08E140C01_Flavobacteriales_35_8
OR_08142018_2_5m_0_1um_scaffold_7_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19685..21751)
DNA (2067bp) protein (689aa)
Uncharacterized protein containing piwi/argonaute domain n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7Z0_BELBD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_23
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(21762..24716)
DNA (2955bp) protein (985aa)
DEAD/DEAH box helicase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248FC3D
Uncharacterized protein {ECO:0000313|EMBL:KKP51666.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_7_24
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24724..25620)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037ED723
Uncharacterized protein {ECO:0000313|EMBL:CCX45136.1}; TaxID=1262917 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_7_25
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25622..27754)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037CF766
Putative ATPase {ECO:0000313|EMBL:CCX45135.1}; TaxID=1262917 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
ATPase
OR_08142018_2_5m_0_1um_scaffold_7_26
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(27758..28996)
DNA (1239bp) protein (413aa)
Type I restriction-modification system specificity determinant n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9P9Z8_XYLFA
Restriction endonuclease S subunit {ECO:0000313|EMBL:KKP51662.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
type I restriction-modification system specificity determinant
OR_08142018_2_5m_0_1um_scaffold_7_27
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(28997..30766)
DNA (1770bp) protein (590aa)
N-6 DNA methylase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248FC41
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:KKP51661.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
type I restriction-modification system methyltransferase subunit
OR_08142018_2_5m_0_1um_scaffold_7_28
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30766..31059)
DNA (294bp) protein (98aa)
Helix-turn-helix protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU49_SOLCM
Helix-turn-helix protein
Helix-turn-helix protein {ECO:0000313|EMBL:AFD07029.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
OR_08142018_2_5m_0_1um_scaffold_7_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31223..33466)
DNA (2244bp) protein (748aa)
VirE protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GD72_LACS5
VirE protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_1um_scaffold_7_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(33496..33798)
DNA (303bp) protein (101aa)
DNA binding domain protein, excisionase family id=4339294 bin=GWA2_Bacteroidetes_40_14 species=Cellulophaga lytica genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
DNA-binding domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 414 in total

View Taxonomy