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OR_08142018_2_5m_0_1um_scaffold_374

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_1um_scaffold_374_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..294
DNA (294bp) protein (98aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase id=1332267 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

504..821
DNA (318bp) protein (106aa)
Flagellar transcriptional regulator FlhD id=1332266 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional activator FlhD
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

856..1407
DNA (552bp) protein (184aa)
Flagellar transcriptional regulator FlhC id=1332265 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional activator FlhC
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1430..2188
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CEF9C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OR_08142018_2_5m_0_1um_scaffold_374_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2344..3204
DNA (861bp) protein (287aa)
Probable chemotaxis transmembrane protein MotA id=1332263 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar motor protein MotA
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3237..4169
DNA (933bp) protein (311aa)
flagellar motor protein MotB n=1 Tax=Thiobacillus thioparus RepID=UPI000382B7CC
motB; flagellar motor protein MotB
Outer membrane chemotaxis MotB protein {ECO:0000313|EMBL:AAZ97197.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_374_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4320..5474
DNA (1155bp) protein (385aa)
flagellar biosynthesis protein FlhB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ADE0A
flagellar biosynthetic protein FlhB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_374_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..7555
DNA (2085bp) protein (695aa)
flagellar biosynthesis protein FlhA n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF65E
flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_374_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7552..8820
DNA (1269bp) protein (423aa)
flagellar biosynthesis regulator FlhF n=1 Tax=Thiobacillus thioparus RepID=UPI00037C9F8B
flhF; flagellar biosynthesis regulator FlhF
Putative flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:AAZ97200.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
OR_08142018_2_5m_0_1um_scaffold_374_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8813..9694
DNA (882bp) protein (294aa)
Putative flagellar biosynthesis protein FlhG id=1357064 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar biosynthesis protein FlhG
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9704..10435
DNA (732bp) protein (244aa)
RNA polymerase sigma factor id=1357065 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RNA polymerase sigma-70 factor
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..11154
DNA (738bp) protein (246aa)
Chemotaxis transmembrane protein MotA id=1357066 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
motC; flagellar motor protein
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11159..11935
DNA (777bp) protein (259aa)
Outer membrane chemotaxis MotB protein id=1357067 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar motor protein MotD
Tax=GWE1_Thiobacillus_62_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11995..14376
DNA (2382bp) protein (794aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PIM1 peptidase (EC:3.4.21.53)
Lon protease n=1 Tax=Thiobacillus denitrificans RepID=UPI000368420C
OR_08142018_2_5m_0_1um_scaffold_374_15
unknown

Not on your lists

comp(14493..14627)
DNA (135bp) protein (45aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_374_16
unknown

Not on your lists

15146..15259
DNA (114bp) protein (38aa)

This feature has no annotations

OR_08142018_2_5m_0_1um_scaffold_374_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15377..15616
DNA (240bp) protein (80aa)
hypothetical protein id=12493962 bin=THIO_HI species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
OR_08142018_2_5m_0_1um_scaffold_374_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15613..16038
DNA (426bp) protein (142aa)
hypothetical protein id=12497365 bin=THIO_MID species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
twitching motility protein PilT
Tax=RBG_16_Betaproteobacteria_58_11_curated
OR_08142018_2_5m_0_1um_scaffold_374_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16168..16413
DNA (246bp) protein (82aa)
hypothetical protein id=12493564 bin=THIO_HI species=Thioalkalivibrio sp. ALJ17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type I restriction modification system, restriction subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_1um_scaffold_374_20
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16416..19484
DNA (3069bp) protein (1023aa)
Type I restriction-modification system restriction subunit n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N5M6_9BURK
Type I restriction-modification system restriction subunit {ECO:0000313|EMBL:AGX86816.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
type I restriction-modification system restriction subunit
OR_08142018_2_5m_0_1um_scaffold_374_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

19474..20730
DNA (1257bp) protein (419aa)
Restriction modification system DNA specificity domain n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMN0_OPITP
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ACB74375.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
OR_08142018_2_5m_0_1um_scaffold_374_22
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21171..21494
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSZ4_9GAMM
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
OR_08142018_2_5m_0_1um_scaffold_374_23
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21491..22492
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1Q6E0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EJI86758.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
hypothetical protein
OR_08142018_2_5m_0_1um_scaffold_374_24
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22489..24129
DNA (1641bp) protein (547aa)
Type I restriction-modification system, M subunit n=3 Tax=Acidithiobacillus RepID=B5ELN6_ACIF5
type I restriction-modification system, M subunit
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ACH84220.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
OR_08142018_2_5m_0_1um_scaffold_374_25
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24440..24733
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00035FA467
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:EYC50926.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
Displaying 25 items

View Taxonomy