ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_75_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(136..585)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(672..1934)
-----------------
DNA (1263bp)
protein (421aa)
adenylosuccinate synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00037AB03D
adenylosuccinate synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1993..4254)
-----------------
DNA (2262bp)
protein (754aa)
MFS transporter n=1 Tax=Segetibacter koreensis RepID=UPI0003762745
(p)ppGpp synthetase I SpoT/RelA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4338..5309
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQD3_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5333..7150
-----------------
DNA (1818bp)
protein (606aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B1441
xenobiotic-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7191..8282
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BDA96
ATP synthase F0 subcomplex subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8309..8557
-----------------
DNA (249bp)
protein (83aa)
ATP synthase subunit C n=1 Tax=Segetibacter koreensis RepID=UPI000379384A
ATP synthase subunit C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8643..9137
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003772216
ATP synthase F0 subcomplex subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9141..9704
-----------------
DNA (564bp)
protein (188aa)
ATP synthase subunit delta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP09_NIAKG
ATP synthase F1 subcomplex subunit delta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9741..11318
-----------------
DNA (1578bp)
protein (526aa)
ATP synthase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP10_NIAKG
ATP synthase F1 subcomplex subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11391..12233
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B46CD1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12264..12989)
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003780F6E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13095..15356
-----------------
DNA (2262bp)
protein (754aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371788D
TonB-dependent receptor plug
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15377..15652
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP14_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15683..16312
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP15_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16378..16977
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP16_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16967..17650
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT89_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17643..17927
-----------------
DNA (285bp)
protein (95aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00036A2D3E
transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17961..18896
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DCAB8
phosphonate-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18874..19749
-----------------
DNA (876bp)
protein (292aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CFD33
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19760..20461
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373BE98
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20462..21331)
-----------------
DNA (870bp)
protein (290aa)
Aldose 1-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDC0_NIAKG
aldose 1-epimerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21336..22430)
-----------------
DNA (1095bp)
protein (365aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036659E3
4-hydroxythreonine-4-phosphate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


22471..23226
-----------------
DNA (756bp)
protein (252aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003798AF0
dimethyladenosine transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23237..24175
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F429D
Phosphoglycerate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24172..24849)
-----------------
DNA (678bp)
protein (226aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24836..25225)
-----------------
DNA (390bp)
protein (130aa)
Transcriptional regulator, GntR family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSN4_9SPHI
GntR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25240..26067)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLH8_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26073..26906)
-----------------
DNA (834bp)
protein (278aa)
ABC transporter ATP-binding protein n=1 Tax=Pedobacter agri RepID=UPI00029A6FC9
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_75_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27085..27561
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362C725
transcription elongation factor GreA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 82 in total

View Taxonomy