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OR_08142018_2_5m_0_2um_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_139_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..585
DNA (585bp) protein (195aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI000368467C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

582..1076
DNA (495bp) protein (165aa)
Putative lipoprotein B transmembrane id=1320909 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lipoprotein B transmembrane
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1073..2110
DNA (1038bp) protein (346aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit id=1320908 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2116..3393
DNA (1278bp) protein (426aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
gamma-glutamyl phosphate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036924DC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3394..4170
DNA (777bp) protein (259aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C9FE7
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4167..4526
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003611A43
Iojap-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4560..4997
DNA (438bp) protein (146aa)
Ribosomal RNA large subunit methyltransferase H id=1358719 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5012..5623
DNA (612bp) protein (204aa)
Maf-like protein Tbd_2438 id=1358718 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
maf; Maf-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5633..7084
DNA (1452bp) protein (484aa)
RNAse G (EC:3.1.4.-)
Ribonuclease E and G id=1358717 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7117..7743
DNA (627bp) protein (209aa)
DNA-3-methyladenine glycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F3C80
DNA-3-methyladenine glycosylase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7800..9314)
DNA (1515bp) protein (505aa)
hypothetical protein id=12493025 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9420..9797)
DNA (378bp) protein (126aa)
diacylglycerol kinase (EC:2.7.1.107)
diacylglycerol kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F5CB8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9794..11245)
DNA (1452bp) protein (484aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase subunit 2 n=1 Tax=Thiobacillus thioparus RepID=UPI00037BF8F0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11361..11852)
DNA (492bp) protein (164aa)
thiol peroxidase (EC:1.11.1.5)
lipid hydroperoxide peroxidase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5D00
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11907..12191)
DNA (285bp) protein (95aa)
hypothetical protein id=12495872 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12202..13596)
DNA (1395bp) protein (465aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=GCSPA_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13695..14084)
DNA (390bp) protein (130aa)
glycine cleavage system protein H n=1 Tax=Thiobacillus thioparus RepID=UPI00038058BB
glycine cleavage system protein H
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14227..15378)
DNA (1152bp) protein (384aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase id=2743906 bin=GWF1_Xanthomonadales_69_6 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15647..16636)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003752537
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16633..17523)
DNA (891bp) protein (297aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
ribosomal protein L11 methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000380BC49
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17589..18944)
DNA (1356bp) protein (452aa)
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] id=12493035 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19063..19512)
DNA (450bp) protein (150aa)
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein id=12495865 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
biotin carboxyl carrier protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19481..20011)
DNA (531bp) protein (177aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=1366633 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..20610)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003693E55
thioredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20664..21803)
DNA (1140bp) protein (380aa)
Putative transmembrane cytochrome C-type biogenesis transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMA9_THIDA
transmembrane cytochrome C-type biogenesis transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21837..23849)
DNA (2013bp) protein (671aa)
cytochrome C biogenesis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F3251
cytochrome c-type biogenesis protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23946..24572)
DNA (627bp) protein (209aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE16C
cytochrome c oxidase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24590..25297
DNA (708bp) protein (236aa)
GTP-binding protein YsxC n=1 Tax=Thiobacillus thioparus RepID=UPI00035DD67D
cell division checkpoint GTPase YihA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25466..26476
DNA (1011bp) protein (337aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DC86
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OR_08142018_2_5m_0_2um_scaffold_139_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26545..27327
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380083B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96143.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying items 1-30 of 52 in total

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