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OR_10152018_dam_0_1um_scaffold_283

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_10152018_dam_0_1um_scaffold_283_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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3..149
DNA (147bp) protein (49aa)
Cell wall degradation protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ED97_9SPHI
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

216..1385
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CFE86
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1489..3312
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C5FCA
DNA polymerase III subunits gamma and tau
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3390..3854
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003785DFF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07584.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
OR_10152018_dam_0_1um_scaffold_283_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4020..4364)
DNA (345bp) protein (115aa)
translation initiation factor SUI1 n=1 Tax=Segetibacter koreensis RepID=UPI0003638A3D
SUI1 family translation initiation factor {ECO:0000313|EMBL:KIC92369.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
translation initiation factor SUI1
OR_10152018_dam_0_1um_scaffold_283_6

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comp(4445..5305)
DNA (861bp) protein (287aa)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT54_9SPHI
PASTA domain protein {ECO:0000313|EMBL:AIA16524.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nicotinate-nucleotide pyrophosphorylase
OR_10152018_dam_0_1um_scaffold_283_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(5387..5770)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003723C1D
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5887..7407
DNA (1521bp) protein (507aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR4_NIAKG
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OR_10152018_dam_0_1um_scaffold_283_9

Not on your lists

7426..7920
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377CCF3
Cytochrome C {ECO:0000313|EMBL:KHD90187.1}; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
cytochrome C
OR_10152018_dam_0_1um_scaffold_283_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8012..8656
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003750D26
GTP-binding protein engB
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8720..9193)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSP3_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_12
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9394..10272
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7P1T4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR04559.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
OR_10152018_dam_0_1um_scaffold_283_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

10285..11256
DNA (972bp) protein (324aa)
Uncharacterized protein id=4692118 bin=GWA2__Bacteriovorax-rel_49_15 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
16S RNA G1207 methylase RsmC
Tax=BJP_IG2069_Ignavibacteriae_38_11
OR_10152018_dam_0_1um_scaffold_283_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11293..12108)
DNA (816bp) protein (272aa)
Glycosyl transferase family 2 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYA6_DYAFD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACT91585.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
OR_10152018_dam_0_1um_scaffold_283_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12210..13265)
DNA (1056bp) protein (352aa)
Glycosyl transferase group 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG25_CHIPD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU58008.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
OR_10152018_dam_0_1um_scaffold_283_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13403..15205
DNA (1803bp) protein (601aa)
ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI0003609FAA
rsaD2; ABC superfamily ATP binding cassette transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15348..15791)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AA9AF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_10152018_dam_0_1um_scaffold_283_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15934..18210
DNA (2277bp) protein (759aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035D2BE6
Energy transducer TonB {ECO:0000313|EMBL:KIA95866.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
OR_10152018_dam_0_1um_scaffold_283_19
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18216..18512)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A914C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII51679.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
Displaying 19 items

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