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PLM0_60_b1_sep16_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_364_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..560
DNA (558bp) protein (186aa)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Undecaprenyl-diphosphatase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UPPP_GEMAT
uppP; UDP-diphosphatase
PLM0_60_b1_sep16_scaffold_364_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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703..1302
DNA (600bp) protein (200aa)
Biotin--[acetyl-CoA-carboxylase] ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:AHG90696.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1299..2072
DNA (774bp) protein (258aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
pantothenate kinase, type III
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM0_60_b1_sep16_scaffold_364_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2227..2541
DNA (315bp) protein (105aa)
10 kDa chaperonin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH10_GEMAT
groES; 10 kDa chaperonin
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_364_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2566..4206
DNA (1641bp) protein (547aa)
60 kDa chaperonin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH60_GEMAT
60 kDa chaperonin
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_6
Propionibacterium humerusii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4805..5938
DNA (1134bp) protein (378aa)
metX_hom; homoserine O-acetyltransferase/homoserine dehydrogenase (EC:1.1.1.3 2.3.1.31)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium humerusii HL044PA1.;"
Homoserine dehydrogenase Tax=Propionibacterium RepID=E4ABA9_PROAA
PLM0_60_b1_sep16_scaffold_364_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5935..6921
DNA (987bp) protein (329aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
homoserine O-acetyltransferase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000311FA9C
homoserine O-acetyltransferase
PLM0_60_b1_sep16_scaffold_364_8
unknown

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comp(7665..7955)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_364_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8069..9253
DNA (1185bp) protein (395aa)
Putative uncharacterized protein Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMZ2_ROBBH
Protein of unknown function DUF2911
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM0_60_b1_sep16_scaffold_364_10
unknown

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9257..9691
DNA (435bp) protein (145aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_364_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9696..10391)
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J2X0_9SPHI
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AHG89771.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10607..13690
DNA (3084bp) protein (1028aa)
glycoside hydrolase Tax=Spirosoma luteum RepID=UPI00037DC541
glycosyl hydrolase
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEE53227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM0_60_b1_sep16_scaffold_364_13
unknown

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13733..14056
DNA (324bp) protein (108aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_364_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13933..14799)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L9_GEMAT
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG90706.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14799..16001)
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type {ECO:0000313|EMBL:AHG90707.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15998..17038)
DNA (1041bp) protein (347aa)
Putative mannose-1-phosphate guanylyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M1_GEMAT
Nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:AHG90708.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17035..17451)
DNA (417bp) protein (139aa)
Two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M2_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG90709.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17455..17808)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
Roadblock/LC7 family protein
Roadblock/LC7 family protein {ECO:0000313|EMBL:AHG90710.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_364_19
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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17871..18521
DNA (651bp) protein (217aa)
Tax=RBG_16_Acidobacteria_68_9_curated
PLM0_60_b1_sep16_scaffold_364_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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18540..19694
DNA (1155bp) protein (385aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Serine--tRNA ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SYS_GEMAT
PLM0_60_b1_sep16_scaffold_364_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19698..20837
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase
PLM0_60_b1_sep16_scaffold_364_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20954..23242
DNA (2289bp) protein (763aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-dependent DNA helicase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT
UvrD-like DNA helicase
PLM0_60_b1_sep16_scaffold_364_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23242..23556
DNA (315bp) protein (105aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M8_GEMAT
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
PLM0_60_b1_sep16_scaffold_364_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23553..25118
DNA (1566bp) protein (522aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M9_GEMAT
Glutamyl-tRNA(Gln) amidotransferase subunit A
PLM0_60_b1_sep16_scaffold_364_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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25115..26557
DNA (1443bp) protein (481aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N0_GEMAT
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
PLM0_60_b1_sep16_scaffold_364_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26530..27450)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38591.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_364_27
unknown

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comp(27461..27925)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_364_28
unknown

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comp(27903..28514)
DNA (612bp) protein (204aa)
hypothetical protein
PLM0_60_b1_sep16_scaffold_364_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28643..29944
DNA (1302bp) protein (434aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Bradyrhizobium sp. YR681 RepID=J2W2Q7_9BRAD
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
PLM0_60_b1_sep16_scaffold_364_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29947..30648
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N4_GEMAT
Multi-copper polyphenol oxidoreductase, laccase
Multi-copper polyphenol oxidoreductase, laccase {ECO:0000313|EMBL:AHG90721.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 39 in total

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