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PLM0_60_coex_redo_sep16_scaffold_810

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_810_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..655)
DNA (654bp) protein (218aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G374_GEOUR
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:GAM10703.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
binding-protein-dependent transport systems inner membrane component
PLM0_60_coex_redo_sep16_scaffold_810_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(652..1623)
DNA (972bp) protein (324aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C940_SPHTD
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ40333.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM0_60_coex_redo_sep16_scaffold_810_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1668..3398)
DNA (1731bp) protein (577aa)
Extracellular solute-binding protein family 5 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C939_SPHTD
extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ40332.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM0_60_coex_redo_sep16_scaffold_810_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3477..3803
DNA (327bp) protein (109aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM0_60_coex_redo_sep16_scaffold_810_5
actinobacterium acIB-AMD-7, Actinobacteria, Actinobacteria, Bacteria

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3803..6220
DNA (2418bp) protein (806aa)
helicase (EC:3.6.4.13)
hypothetical protein Tax=actinobacterium SCGC AAA278-O22 RepID=UPI000363AE6F
Uncharacterized protein {ECO:0000313|EMBL:KGA07470.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acIB-AMD-7.;"
PLM0_60_coex_redo_sep16_scaffold_810_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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6395..7537
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003819E7F
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCM65249.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
NAD-dependent epimerase/dehydratase
PLM0_60_coex_redo_sep16_scaffold_810_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7491..8261)
DNA (771bp) protein (257aa)
3-ketoacyl-ACP reductase Tax=Rhodococcus ruber RepID=UPI00034AC879
Uncharacterized protein {ECO:0000313|EMBL:EXG79360.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
short-chain dehydrogenase/reductase SDR
PLM0_60_coex_redo_sep16_scaffold_810_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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8284..8733
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQ64_ACIS0
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
PLM0_60_coex_redo_sep16_scaffold_810_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(8781..9866)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZF1_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM05385.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM0_60_coex_redo_sep16_scaffold_810_10
unknown

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9990..10262
DNA (273bp) protein (91aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_810_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(10346..12124)
DNA (1779bp) protein (593aa)
Peptidase S9, prolyl oligopeptidase active site region Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ90_RUBXD
peptidase S9, prolyl oligopeptidase active site region
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:ABG03288.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM0_60_coex_redo_sep16_scaffold_810_12
unknown

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comp(12158..12679)
DNA (522bp) protein (174aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_810_13
unknown

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comp(12676..13344)
DNA (669bp) protein (223aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_810_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(13341..13904)
DNA (564bp) protein (188aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM0_60_coex_redo_sep16_scaffold_810_15
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(13981..14550)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5E5I0_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD82335.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
hypothetical protein
Displaying 15 items

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