ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_3831

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_3831_1
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..434)
DNA (432bp) protein (144aa)
Glycoside hydrolase family 57 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFW6_9CHLR
glycoside hydrolase family protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM0_60_coex_redo_sep16_scaffold_3831_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(427..1752)
DNA (1326bp) protein (442aa)
Glycosyl transferase group 1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFW7_9CHLR
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM0_60_coex_redo_sep16_scaffold_3831_3
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1749..2507)
DNA (759bp) protein (253aa)
inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWC2_Nitrospirae_57_13 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_9_curated
PLM0_60_coex_redo_sep16_scaffold_3831_4
unknown

Not on your lists

comp(2586..2864)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_3831_5
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2875..3747)
DNA (873bp) protein (291aa)
putative epoxide hydrolase (EC:3.3.2.-)
Hydrolase, alpha/beta domain protein Tax=Rhodococcus RepID=C3JU79_RHOER
Epoxide hydrolase {ECO:0000313|EMBL:EME17986.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
PLM0_60_coex_redo_sep16_scaffold_3831_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3752..4291)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WGW2_9NOCA
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM0_60_coex_redo_sep16_scaffold_3831_7
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4788..5789)
DNA (1002bp) protein (334aa)
thiO; glycine oxidase (EC:1.4.3.19)
Glycine oxidase ThiO Tax=Brevibacillus sp. BC25 RepID=J2GVE9_9BACL
Glycine oxidase ThiO {ECO:0000313|EMBL:EJL26883.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
PLM0_60_coex_redo_sep16_scaffold_3831_8
Aquifex pyrophilus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists


5905..6648
DNA (744bp) protein (248aa)
Protein RecA Tax=Aquifex pyrophilus RepID=RECA_AQUPY
Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268}; Recombinase A {ECO:0000255|HAMAP-Rule:MF_00268}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex pyrophilus.;"
recA; recombinase A
PLM0_60_coex_redo_sep16_scaffold_3831_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6627..7766
DNA (1140bp) protein (380aa)
dinP; DNA polymerase IV (EC:2.7.7.7)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00036CA18D
DNA polymerase-like protein PA0670 {ECO:0000313|EMBL:CEL22306.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
PLM0_60_coex_redo_sep16_scaffold_3831_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7763..8011
DNA (249bp) protein (83aa)
hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 10 items

View Taxonomy