ggKbase home page

PLM0_60_coex_redo_sep16_scaffold_4005

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_coex_redo_sep16_scaffold_4005_1
unknown

Not on your lists

2..136
DNA (135bp) protein (45aa)

This feature has no annotations

PLM0_60_coex_redo_sep16_scaffold_4005_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..597)
DNA (396bp) protein (132aa)
iojap family protein; K09710 ribosome-associated protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
iojap-like ribosome-associated protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM0_60_coex_redo_sep16_scaffold_4005_3
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(581..1012)
DNA (432bp) protein (144aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:AKG54401.1}; EC=2.7.7.18 {ECO:0000313|EMBL:AKG54401.1};; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI46_RHOMR
PLM0_60_coex_redo_sep16_scaffold_4005_4
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1177..2250)
DNA (1074bp) protein (358aa)
GTPase Obg Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLA4_SYNLT
GTP-binding protein Obg/CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
PLM0_60_coex_redo_sep16_scaffold_4005_5
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(2429..2713)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 Tax=Synechocystis sp. PCC 7509 RepID=L8KZ64_9SYNC
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
50S ribosomal protein L25
PLM0_60_coex_redo_sep16_scaffold_4005_6
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists


comp(2713..3237)
DNA (525bp) protein (175aa)
50S ribosomal protein L21 (EC:2.3.1.61)
50S ribosomal protein L21 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=GWC2_Chloroflexi_49_37_curated
PLM0_60_coex_redo_sep16_scaffold_4005_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(3206..4327)
DNA (1122bp) protein (374aa)
Cell shape-determining protein RodA Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5R2_PELCD
rodA; cell shape-determining protein RodA
Tax=RBG_16_Chloroflexi_64_32_curated
PLM0_60_coex_redo_sep16_scaffold_4005_8
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4324..6120)
DNA (1797bp) protein (599aa)
Peptidoglycan glycosyltransferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKR43779.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
mrdA; peptidoglycan transpeptidase
PLM0_60_coex_redo_sep16_scaffold_4005_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6189..6692)
DNA (504bp) protein (168aa)
Rod shape-determining protein MreD bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rod shape-determining protein MreD
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM0_60_coex_redo_sep16_scaffold_4005_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(6689..7504)
DNA (816bp) protein (272aa)
Rod shape-determining protein MreC bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
mreC; rod shape-determining protein MreC
Tax=CSP1_3_Armatimonadetes
PLM0_60_coex_redo_sep16_scaffold_4005_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7516..8028)
DNA (513bp) protein (171aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins bin=RBG_19FT_COMBO_GAL15_69_19 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rod shape-determining protein MreB
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Displaying 11 items

View Taxonomy