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PLM1_100_b1_sep16_scaffold_23499

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_23499_1

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87..470
DNA (384bp) protein (128aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Putative uncharacterized protein (Fragment) Tax=sediment metagenome RepID=D9PIZ9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96465.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
PLM1_100_b1_sep16_scaffold_23499_2
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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467..1879
DNA (1413bp) protein (471aa)
Putative transcriptional regulator with HTH domain Tax=Opitutaceae bacterium TAV1 RepID=I6AYG7_9BACT
Putative transcriptional regulator with HTH domain {ECO:0000313|EMBL:EIQ00059.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
transcriptional regulator
PLM1_100_b1_sep16_scaffold_23499_3
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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comp(1777..2676)
DNA (900bp) protein (300aa)
Tax=GWF2_Lentisphaerae_52_8_curated
PLM1_100_b1_sep16_scaffold_23499_4
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2678..3589
DNA (912bp) protein (304aa)
restriction endonuclease Tax=Lamprocystis purpurea RepID=UPI000368401F
type I restriction-modification system restriction subunit
Type I restriction-modification system restriction subunit {ECO:0000313|EMBL:AAM31988.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 /; JCM 11833 / OCM 88) (Methanosarcina frisia).;"
PLM1_100_b1_sep16_scaffold_23499_5
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3586..4923
DNA (1338bp) protein (446aa)
Type I site-specific deoxyribonuclease, HsdR family Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L009_METHD
type I site-specific deoxyribonuclease, HsdR family
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AGB49584.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
PLM1_100_b1_sep16_scaffold_23499_6
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4923..5639
DNA (717bp) protein (239aa)
Putative metal-dependent hydrolase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY09_METHD
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AKB77547.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
putative metal-dependent hydrolase
PLM1_100_b1_sep16_scaffold_23499_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5839..6486)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZIT2_SHEVD
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM1_100_b1_sep16_scaffold_23499_8
unknown

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comp(6818..7396)
DNA (579bp) protein (193aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_23499_9
unknown

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7848..8072
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 9 items

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