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PLM1_100_b1_sep16_scaffold_20139

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_20139_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Type III pantothenate kinase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MR56_CORCM
coaX; pantothenate kinase
PLM1_100_b1_sep16_scaffold_20139_2
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(419..1228)
DNA (810bp) protein (270aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase Tax=Thermincola potens (strain JR) RepID=D5X9N7_THEPJ
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM1_100_b1_sep16_scaffold_20139_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1309..2250)
DNA (942bp) protein (314aa)
Fis family transcriptional regulator {ECO:0000313|EMBL:ETX08016.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Response regulator receiver protein bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
response regulator
PLM1_100_b1_sep16_scaffold_20139_4
unknown

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comp(2524..2736)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_20139_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2799..3716
DNA (918bp) protein (306aa)
Permease YjgP/YjgQ family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7W9_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ETX08360.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
YjgP/YjgQ family permease
PLM1_100_b1_sep16_scaffold_20139_6
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3601..3891)
DNA (291bp) protein (97aa)
Putative Holliday junction resolvase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RUVX_CARHZ
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM1_100_b1_sep16_scaffold_20139_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3902..5521)
DNA (1620bp) protein (540aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI000381D914
Uncharacterized protein {ECO:0000313|EMBL:ETW93467.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_20139_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5653..6267
DNA (615bp) protein (205aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Riboflavin biosynthesis protein RibF Tax=Nitrospina gracilis 3/211 RepID=M1YWY2_9BACT
riboflavin biosynthesis protein RibF
PLM1_100_b1_sep16_scaffold_20139_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6234..6542
DNA (309bp) protein (103aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Riboflavin biosynthesis protein RibF Tax=Desulfovibrio sp. A2 RepID=G2H8A4_9DELT
riboflavin biosynthesis protein RibF
PLM1_100_b1_sep16_scaffold_20139_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6593..7291
DNA (699bp) protein (233aa)
cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Cytidylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX08026.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM1_100_b1_sep16_scaffold_20139_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7288..9150
DNA (1863bp) protein (621aa)
30S ribosomal protein S1 Tax=Nitrospina gracilis 3/211 RepID=M1YW03_9BACT
30S ribosomal protein S1 {ECO:0000313|EMBL:ETW99890.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rpsA; 30S ribosomal protein S1
PLM1_100_b1_sep16_scaffold_20139_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9376..9654
DNA (279bp) protein (93aa)
Integration host factor, beta subunit Tax=Nitrospina gracilis 3/211 RepID=M1YX18_9BACT
Integration host factor subunit beta {ECO:0000313|EMBL:ETW99891.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
histone family protein DNA-binding protein
PLM1_100_b1_sep16_scaffold_20139_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9786..10277
DNA (492bp) protein (164aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
tRNA dimethylallyltransferase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QF60_DESB2
tRNA delta(2)-isopentenylpyrophosphate transferase
Displaying 13 items

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